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Protein Overview: gi|190407993

General Information:
Name(s) found: gi|190407993 [NCBI NR]
Description(s) found:
  • gi|190407993|gb|EDV11258.1| exocyst complex component SEC8 [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
    • Organism: Saccharomyces cerevisiae RM11-1a
    Length: 1065 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYLKPAQKG RRRGLSINSL SETQQSAMNS SLDHLQNDLN RINLQWNRIL SDNTNPLELA  60
   61 LAFLDDTSVG LGHRYEEFNQ LKSQIGSHLQ DVVNEHSQVF NTNVASYGKA VSSIMQAQEQ 120
  121 TLNLKNCLKE ANEKITTDKG SLQELNDNNL KYTKMIDVLV NIEELLQIPE KIEENIRKEN 180
  181 FHQVQILLER GFILMNNKSL KTVEILKPIN QQLELQEHLL FNNLIEEIHD IMYSKSNKTN 240
  241 FTRVTNNDIF KIISISHNGF TSLENYLYNI VNIDIMEHSK TINKNLEQFI HDQSLNKGNI 300
  301 MLQENAATQA PLAPSRNQEN EGFNRIGFLL KTINNINKLP VAFNIITERA KEEIHNIIVK 360
  361 STESIRSKHP SLLKMATSLK NDNHFGLPVQ DILSIILREC FWEIFLKLLY AIQCHRAIFE 420
  421 MSNILQPTSS AKPAFKFNKI WGKLLDEIEL LLVRYINDPE LISSNNGSIK PINGATNNAP 480
  481 TLPKRKNPKI FSLEYNIEDN SSVKDQAFEL KALLKDIFPG FSVSSNMDLD SIYVKDESFE 540
  541 QDEPLVPPSV FNMKVILDPF LLFTQSTSTI VPSVLTQNTI SSLTFFDDYM NKSFLPKIQM 600
  601 TMDYLFTVEV ESNNPYALEL SDENHNIFKT ALDFQRLFYN LLNVFNTANT FREKISYCIL 660
  661 DLLNHFYNYY LGLFNSLIGT SDRHLTRKII TAWLQNGILM DQEQKILNGD ETLFHEESIE 720
  721 LFKEIPHFYQ AGKGLSKSDL FNNLTLDTIL QFSASVLWIL NWLPGLKKAI NIDEVSQEPM 780
  781 LDADRLRSSW TFSESMDLNY SNPSSSPNSL GNLKILLDDK ASKKFDETID GFKTLKFKLI 840
  841 TILRFNIRAL CIYDIGSFFQ NTKIWNMDVG SIELDQNIAS LISELRRTES KLKQQLPEKE 900
  901 KNSIFIGLDI VNNYALIKGA KSIKVLNHNG IKKMLRNVNV LQHAYRNLSS EPSKINMNVT 960
  961 MNFYSLCGSS EAELFEYIKD NELPHCSVED LKTILRLQFS EEMHRQLKRQ STSSTKGSIK1020
 1021 PSNKRYTEAL EKLSNLEKEQ SKEGARTKIG KLKSKLNAVH TANEK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..320] PSI-BLAST 12.69897 Heavy meromyosin subfragment
    2 View Details [321..547] MSA 2.317989 View MSA. No confident structure predictions are available.
    3 View Details [548..677] MSA 1.015981 View MSA. Confident ab initio structure predictions are available.
    4 View Details [678..744] deduced N/A No confident structure predictions are available.
    5 View Details [745..1013] MSA 1.013948 View MSA. No confident structure predictions are available.
    6 View Details [1014..1065] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle