| Protein: | ECM23 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 187 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ECM23.
| Description | E-value | Query Range |
Subject Range |
|
|
7.0E-30 | [1..187] | [1..187] |
|
|
1.0E-25 | [14..185] | [42..217] |
|
|
1.0E-24 | [73..186] | [68..180] |
|
|
2.0E-24 | [11..185] | [95..278] |
|
|
5.0E-24 | [9..182] | [51..233] |
|
|
7.0E-24 | [3..174] | [168..342] |
|
Region A: Residues: [1-116] |
1 11 21 31 41 51
| | | | | |
1 MLYNKEQGTS GASSSGRRTK FHFDRFVQMV LFIAANPNYC CSVASIPKSG VTPDLKRADI 60
61 LEQKIKSLNS ALSPKLKEES RLGGPLHNPS ILPAPSFSSL PISSNGKKSL AGYRPK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.479 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.450 | a.26.1 | 4-helical cytokines |
| View | Download | 0.350 | a.7.7 | BAG domain |
| View | Download | 0.348 | a.68.1 | Wiscott-Aldrich syndrome protein, WASP, C-terminal domain |
| View | Download | 0.479 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.450 | a.26.1 | 4-helical cytokines |
| View | Download | 0.428 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.350 | a.7.7 | BAG domain |
| View | Download | 0.348 | a.68.1 | Wiscott-Aldrich syndrome protein, WASP, C-terminal domain |
| View | Download | 0.345 | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.332 | d.109.2 | C-terminal, gelsolin-like domain of Sec23/24 |
| View | Download | 0.331 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.321 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.320 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.315 | d.201.1 | SRP19 |
| View | Download | 0.309 | a.47.2 | t-snare proteins |
| View | Download | 0.309 | a.26.1 | 4-helical cytokines |
| View | Download | 0.291 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.291 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.291 | a.90.1 | Transcription factor STAT-4 N-domain |
| View | Download | 0.288 | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.268 | a.96.1 | DNA-glycosylase |
| View | Download | 0.254 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.252 | c.52.1 | Restriction endonuclease-like |
| View | Download | 0.250 | f.1.5 | Exotoxin A, middle domain |
| View | Download | 0.249 | a.60.13 | Putative methyltransferase TM0872, insert domain |
| View | Download | 0.229 | a.74.1 | Cyclin-like |
| View | Download | 0.229 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.221 | a.46.1 | Methionine synthase domain |
| View | Download | 0.217 | a.135.1 | Tetraspanin |
| View | Download | 0.215 | d.110.2 | GAF domain-like |
| View | Download | 0.214 | a.74.1 | Cyclin-like |
| View | Download | 0.208 | a.39.1 | EF-hand |
| View | Download | 0.202 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
|
Region A: Residues: [117-187] |
1 11 21 31 41 51
| | | | | |
1 SRKKQTILPN GQPKECATCG DTWTSQWRSG PNGNVELCSR CGIAYRKKME KKIRSQQSSD 60
61 DGTKNFIFKN K
|
| Detection Method: | |
| Confidence: | 17.0 |
| Match: | 4gatA_ |
| Description: | Erythroid transcription factor GATA-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.86425331852532 | bayes_pls_golite062009 |
| protein binding | 1.03915863262476 | bayes_pls_golite062009 |
| transcription regulator activity | 0.444271462960894 | bayes_pls_golite062009 |
| DNA binding | 0.286544225540259 | bayes_pls_golite062009 |
| nucleic acid binding | 0.153249001846128 | bayes_pls_golite062009 |
