| Protein: | PUS7 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 676 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUS7.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..676] | [1..676] |
|
|
0.0 | [18..668] | [28..743] |
|
|
0.0 | [34..664] | [43..664] |
|
|
0.0 | [35..664] | [84..632] |
|
|
0.0 | [34..664] | [44..679] |
|
|
0.0 | [40..676] | [2..558] |
|
|
0.0 | [188..664] | [10..411] |
|
|
0.0 | [188..660] | [10..406] |
|
|
0.0 | [188..660] | [11..407] |
|
|
0.0 | [185..662] | [4..413] |
|
Region A: Residues: [1-117] |
1 11 21 31 41 51
| | | | | |
1 MSDSSEATVK RPLDAHVGPS ENAAKKLKIE QRTQADGIHE ADVGITLFLS PELPGFRGQI 60
61 KQRYTDFLVN EIDQEGKVIH LTDKGFKMPK KPQRSKEEVN AEKESEAARR QEFNVDP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [118-607] |
1 11 21 31 41 51
| | | | | |
1 ELRNQLVEIF GEEDVLKIES VYRTANKMET AKNFEDKSVR TKIHQLLREA FKNELESVTT 60
61 DTNTFKIARS NRNSRTNKQE KINQTRDANG VENWGYGPSK DFIHFTLHKE NKDTMEAVNV 120
121 ITKLLRVPSR VIRYAGTKDR RAVTCQRVSI SKIGLDRLNA LNRTLKGMII GNYNFSDASL 180
181 NLGDLKGNEF VVVIRDVTTG NSEVSLEEIV SNGCKSLSEN GFINYFGMQR FGTFSISTHT 240
241 IGRELLLSNW KKAAELILSD QDNVLPKSKE ARKIWAETKD AALALKQMPR QCLAENALLY 300
301 SLSNQRKEED GTYSENAYYT AIMKIPRNLR TMYVHAYQSY VWNSIASKRI ELHGLKLVVG 360
361 DLVIDTSEKS PLISGIDDED FDEDVREAQF IRAKAVTQED IDSVKYTMED VVLPSPGFDV 420
421 LYPSNEELKQ LYVDILKADN MDPFNMRRKV RDFSLAGSYR TVIQKPKSLE YRIIHYDDPS 480
481 QQLVNTDLDI
|
| Detection Method: | |
| Confidence: | 242.0 |
| Match: | PF01142 |
| Description: | tRNA pseudouridine synthase D (TruD) |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| DNA binding | 1.50596754488506 | bayes_pls_golite062009 |
| binding | 1.49983036545301 | bayes_pls_golite062009 |
| nucleic acid binding | 1.46911563206977 | bayes_pls_golite062009 |
| transcription regulator activity | 1.40070005217107 | bayes_pls_golite062009 |
| protein binding | 0.491459233332405 | bayes_pls_golite062009 |
| catalytic activity | 0.307971467423079 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.104498084588774 | bayes_pls_golite062009 |
|
Region A: Residues: [608-676] |
1 11 21 31 41 51
| | | | | |
1 LNNTRAKESG QKYMKAKLDR YMPDKGGEKT AVVLKFQLGT SAYATMALRE LMKLETSRRG 60
61 DMCDVKENI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
