| Protein: | MGM1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 902 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MGM1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..902] | [1..902] |
|
|
0.0 | [80..896] | [72..901] |
|
|
0.0 | [80..896] | [72..901] |
|
|
0.0 | [4..883] | [8..939] |
|
|
0.0 | [4..883] | [8..957] |
|
Region A: Residues: [1-184] |
1 11 21 31 41 51
| | | | | |
1 MSNSTSLRAI PRVANYNTLV RMNASPVRLL ILRRQLATHP AILYSSPYIK SPLVHLHSRM 60
61 SNVHRSAHAN ALSFVITRRS ISHFPKIISK IIRLPIYVGG GMAAAGSYIA YKMEEASSFT 120
121 KDKLDRIKDL GESMKEKFNK MFSGDKSQDG GHGNDGTVPT ATLIAATSLD DDESKRQGDP 180
181 KDDD
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [185-510] |
1 11 21 31 41 51
| | | | | |
1 DEDDDDEDDE NDSVDTTQDE MLNLTKQMIE IRTILNKVDS SSAHLTLPSI VVIGSQSSGK 60
61 SSVLESIVGR EFLPKGSNMV TRRPIELTLV NTPNSNNVTA DFPSMRLYNI KDFKEVKRML 120
121 MELNMAVPTS EAVSEEPIQL TIKSSRVPDL SLVDLPGYIQ VEAADQPIEL KTKIRDLCEK 180
181 YLTAPNIILA ISAADVDLAN SSALKASKAA DPKGLRTIGV ITKLDLVDPE KARSILNNKK 240
241 YPLSMGYVGV ITKTPSSINR KHLGLFGEAP SSSLSGIFSK GQHGQSSGEE NTNGLKQIVS 300
301 HQFEKAYFKE NKKYFTNCQV STKKLR
|
| Detection Method: | |
| Confidence: | 506.529817 |
| Match: | 1jwyB_ |
| Description: | Dynamin G domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.0681607836408 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 1.737153612961 | bayes_pls_golite062009 |
| pyrophosphatase activity | 1.66717045339473 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 1.64692747234601 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 1.64482911944641 | bayes_pls_golite062009 |
| hydrolase activity | 1.16405290417756 | bayes_pls_golite062009 |
| motor activity | 0.50661339105747 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.370109410491501 | bayes_pls_golite062009 |
| nucleotide binding | 0.367488441096941 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.348507955395744 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.348454114797054 | bayes_pls_golite062009 |
| protein binding | 0.193768631623192 | bayes_pls_golite062009 |
|
Region A: Residues: [511-902] |
1 11 21 31 41 51
| | | | | |
1 EKLIKILEIS MSNALEPTST LIQQELDDTS YLFKVEFNDR HLTPKSYLLN NIDVLKLGIK 60
61 EFQEKFHRNE LKSILRAELD QKVLDVLATR YWKDDNLQDL SSSKLESDTD MLYWHKKLEL 120
121 ASSGLTKMGI GRLSTMLTTN AILKELDNIL ESTQLKNHEL IKDLVSNTAI NVLNSKYYST 180
181 ADQVENCIKP FKYEIDLEER DWSLARQHSI NLIKEELRQC NSRYQAIKNA VGSKKLANVM 240
241 GYLENESNLQ KETLGMSKLL LERGSEAIFL DKRCKVLSFR LKMLKNKCHS TIEKDRCPEV 300
301 FLSAVSDKLT STAVLFLNVE LLSDFFYNFP IELDRRLTLL GDEQVEMFAK EDPKISRHIE 360
361 LQKRKELLEL ALEKIDSILV FKKSYKGVSK NL
|
| Detection Method: | |
| Confidence: | 9.46 |
| Match: | 1b89A |
| Description: | Clathrin heavy chain proximal leg segment |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.38363524631144 | bayes_pls_golite062009 |
| protein binding | 1.63424405980235 | bayes_pls_golite062009 |
| protein transporter activity | 0.47381617541112 | bayes_pls_golite062009 |
