| Protein: | NOC2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 710 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NOC2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..710] | [1..710] |
|
|
0.0 | [63..706] | [13..682] |
|
|
0.0 | [63..706] | [8..677] |
|
|
0.0 | [60..709] | [5..681] |
|
|
0.0 | [18..709] | [14..699] |
|
|
0.0 | [39..682] | [4..634] |
|
Region A: Residues: [1-251] |
1 11 21 31 41 51
| | | | | |
1 MGKVSKSTKK FQSKHLKHTL DQRRKEKIQK KRIQGRRGNK TDQEKADAAG TREQQQLKKS 60
61 AKEEVFKDMS VETFFEKGIE IPKENKKLKK KTTKEQSDED SSSSEEEEDM GQSMAKLAEK 120
121 DPEFYKYLEE NDKDLLDFAG TNPLDGIDSQ DEGEDAERNS NIEEKSEQME LEKEKIELSL 180
181 KLVRKWKKQL HDSPSLKLLR NIISAFKVAV NLNKEENIED YKYAITDEKA FHELMFMVLK 240
241 DVPQAIQKMA P
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [252-426] |
1 11 21 31 41 51
| | | | | |
1 YKIVKGARTL PNGGNVSRVS SIVKSHAGSL LILLNDITNT ETAALVLHSV NELMPYLLSY 60
61 RRILKELIKS IVGVWSTTRE LETQIASFAF LINTTKEFKK SMLETTLKTT YSTFIKSCRK 120
121 TNMRSMPLIN FQKNSAAELF GIDEVLGYQV GFEYIRQLAI HLRNTMNATT KKSSK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.830 | 0.297 | ribosome assembly | a.118.1 | ARM repeat |
|
Region A: Residues: [427-710] |
1 11 21 31 41 51
| | | | | |
1 INSAEAYKIV YNWQFCHSLD FWSRVLSFAC QPEKENGSES PLRQLIYPLV QVTLGVIRLI 60
61 PTPQFFPLRF YLIKSLIRLS QNSGVFIPIY PLLSEILTST AFTKAPKKSP NLAAFDFEHN 120
121 IKCTQAYLNT KIYQEGLSEQ FVDLLGDYFA LYCKNIAFPE LVTPVIISLR RYIKTSTNVK 180
181 LNKRLSTVVE KLNQNSTFIQ EKRSDVEFGP TNKSEVSRFL NDVAWNKTPL GSYVAVQREV 240
241 KEEKARLMRE SMEEQDKERE TEEAKLLNSL ESDDDNEDVE MSDA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
