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Protein Overview: YU20_ARATH, NOC2...

General Information:
Name(s) found: YU20_ARATH [Swiss-Prot]
NOC2L_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • (Q9ZPV5) Hypothetical UPF0120 protein At2g18220 [Swiss-Prot]
  • Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana GN=At2g18220 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 779 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAKELKGFE IDKHFKSNVD DKKRVKKLKS KKLEAEEELN NVQEIDAHDI VMEQKSDKKR  60
   61 GKKVKSKKAE AEEHEEELKR LQEKDPDFFQ YMKEHDAELL KFDATEIEDD ADVEPDTDLE 120
  121 DTEKEGDDEA TKMEIAKKVH VQKTITASMV DAWSKSIEDE AKLGGVRSIL RAYRTACHYG 180
  181 DDTGDDQSTK FSVMSSEVFN KIMIYVLSEM DGILRKLLRF PEDTRGTKET ILELTNTRPW 240
  241 KNYNHLVKSY LGNSLHVLNQ MTDTEMITFT LRRLKHSSVF LAAFPSLLRK YIKVALHFWG 300
  301 TGSGALPVVS LLFLRDLCIR LGSDCVDDCF KGMYKAYVLN CQFVNADKLK HISFLGNCFI 360
  361 ELLGTDISAA YQHAFVFIRQ LAMILREALN TKTKEAFRKV YQWKFIHCLE LWTGAVCAYS 420
  421 SQSELRPVAY PLAQIITGVA RLVPTARYTP LRLRCVRMLN RLAAATGTFI PVSMLLVDML 480
  481 EMKELNRPPT GGVGKGVDLR TLLKVSKPAV KTRAFQEACV YTVVEELVEH LSQWSCSVAF 540
  541 FELSFIPTIR LRSFCKSTKA ERFRKEMKQL ISQIEANSEF VNKKRALIKF LPNDLAAESF 600
  601 LEDEKKAGKT PLLQYAEIIR QRAQQRNESL VESDVIVGEN SAVFGKNAPS SDDEDDEDRM 660
  661 EKGAAAFNSS WLPGSDSKEK EPEEEKTKKK KRKRGGKSKT EKKQDEQGLG EDDVVEDFVL 720
  721 SSDEEEEDLF DIGGDKDEDD AVDEIADPET KTSKKTKGTY KTWHKAYKKT KKKKARVAS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..226] deduced N/A No confident structure predictions are available.
    2 View Details [227..401] MSA 1.053953 View MSA. No confident structure predictions are available.
    3 View Details [402..588] MSA 1.078961 View MSA. No confident structure predictions are available.
    4 View Details [589..779] MSA 18.095997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.40

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle