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Protein Overview: SPAC1142.04

General Information:
Name(s) found: SPAC1142.04 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • Noc2p-Noc3p complex subunit Noc2 family [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 707 amino acids

    Gene Ontology:
    Cellular Component: Noc2p-Noc3p complex [ISSLink to PubMed article]
    Noc1p-Noc2p complex [ISS]
    nucleolus [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: ribosomal subunit export from nucleus [ISSLink to PubMed article]
    ribosome biogenesis [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKLSSIIKA RKANALAKKN DKIKKKDTDK GIRQKHSKKE GKDETLKRDV EKFIQNVNSE  60
   61 DTPSEDDSMS MDAFLEGGFE ELDSANSNDA GSSRKRKNLP NENTQDSTSE SSEEEEDGLE 120
  121 SYQKQLEGLK EKDPEFYKFL EQNDQDLLEF NAAETDAMAK EIDENERLKS SSGKIVLTSD 180
  181 TIQQWQKLLE TNHSLTTLQK VVQAFKAAAF LNEEEAEDLK YTISDSKVFN DLLLLAIQYV 240
  241 PKVLNYHVPI QEDAKGKKFI NTDSKVLPKL RPVLKSYGFS ILRLLEGMTD AKNISLLLRE 300
  301 AQNVLPYMIT YRKFLKQFTQ ATVEVWSSTR DDSVRFSAVV LLRTLCLTAD ITLLEFVLKE 360
  361 VYLGMARQSA YTTVHTLDKI NFLKNSAVNL FLLDAESCYL IGFRYIRQLA ITLRNTIHQP 420
  421 SKDSRKPVQS WSYVHSLDFW ARLLSQAAWL SREKGVASEL QSLVYPLVQI ALGVIMSSPS 480
  481 SQLFPMRFHI IRSLIYLSRH TGVFIPLAPS LFEVLDSSYV SRKAKASTLK PLDFDVELRA 540
  541 SSSYLRTKVY QDGLIDQLLE LLSEYYVLYA TDISFPELVI PAIVRSKRFA KRSKNAKLNR 600
  601 GLLTLVNRLE QQSKFMTEKR NQQKFAPIDS DSVEQFAQTI DWQQTPLGIY VVTQRQTREE 660
  661 QRKLIRESVQ QDQEHKEQMR QKKKQALKSD DIELDDLSEE EAEDIDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..173] PSI-BLAST 3.154902 Heavy meromyosin subfragment
    2 View Details [174..252] deduced N/A No confident structure predictions are available.
    3 View Details [253..434] MSA 1.050946 View MSA. No confident structure predictions are available.
    4 View Details [435..625] MSA 1.050975 View MSA. No confident structure predictions are available.
    5 View Details [626..707] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.70

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle