| Protein: | SPAC1142.04 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 707 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC1142.04.
| Description | E-value | Query Range |
Subject Range |
|
|
826.0 | [0..61] | [707..6] |
|
|
821.0 | [0..59] | [707..4] |
|
|
788.0 | [0..60] | [707..5] |
|
|
787.0 | [0..60] | [706..19] |
|
|
785.0 | [0..61] | [707..6] |
|
Region A: Residues: [1-173] |
1 11 21 31 41 51
| | | | | |
1 MVKLSSIIKA RKANALAKKN DKIKKKDTDK GIRQKHSKKE GKDETLKRDV EKFIQNVNSE 60
61 DTPSEDDSMS MDAFLEGGFE ELDSANSNDA GSSRKRKNLP NENTQDSTSE SSEEEEDGLE 120
121 SYQKQLEGLK EKDPEFYKFL EQNDQDLLEF NAAETDAMAK EIDENERLKS SSG
|
| Detection Method: |  |
| Confidence: | 3.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [174-252] |
1 11 21 31 41 51
| | | | | |
1 KIVLTSDTIQ QWQKLLETNH SLTTLQKVVQ AFKAAAFLNE EEAEDLKYTI SDSKVFNDLL 60
61 LLAIQYVPKV LNYHVPIQE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [253-434] |
1 11 21 31 41 51
| | | | | |
1 DAKGKKFINT DSKVLPKLRP VLKSYGFSIL RLLEGMTDAK NISLLLREAQ NVLPYMITYR 60
61 KFLKQFTQAT VEVWSSTRDD SVRFSAVVLL RTLCLTADIT LLEFVLKEVY LGMARQSAYT 120
121 TVHTLDKINF LKNSAVNLFL LDAESCYLIG FRYIRQLAIT LRNTIHQPSK DSRKPVQSWS 180
181 YV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [435-625] |
1 11 21 31 41 51
| | | | | |
1 HSLDFWARLL SQAAWLSREK GVASELQSLV YPLVQIALGV IMSSPSSQLF PMRFHIIRSL 60
61 IYLSRHTGVF IPLAPSLFEV LDSSYVSRKA KASTLKPLDF DVELRASSSY LRTKVYQDGL 120
121 IDQLLELLSE YYVLYATDIS FPELVIPAIV RSKRFAKRSK NAKLNRGLLT LVNRLEQQSK 180
181 FMTEKRNQQK F
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [626-707] |
1 11 21 31 41 51
| | | | | |
1 APIDSDSVEQ FAQTIDWQQT PLGIYVVTQR QTREEQRKLI RESVQQDQEH KEQMRQKKKQ 60
61 ALKSDDIELD DLSEEEAEDI DE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
