| Protein: | FRE7 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 629 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FRE7.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..629] | [1..629] |
|
|
0.0 | [60..609] | [259..867] |
|
|
0.0 | [64..609] | [315..921] |
|
|
0.0 | [64..609] | [315..921] |
|
|
0.0 | [60..609] | [306..939] |
|
|
0.0 | [61..609] | [304..938] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MIEERDLVLS NGIHCIADIH SELYARLKKE SQAATPWVYQ KQYGKFVTYF VAVIIFLSLI 60
61 KKLAFMYYDS SEEFLPEK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [79-314] |
1 11 21 31 41 51
| | | | | |
1 KNSPTTPSVF LARIMTKLVA FNRYICYRKF PTLIFSYLGI PTSVGTFLVV MATTLYTLLY 60
61 CFVPHPFYRP CAGFGSPPLS VRAGIMAISL VPFVFSLSGK INVIGWLVGL SYEKINIYHQ 120
121 WASILCLFFS WVHVIPFLRQ ARHEGGYERM HQRWKASDMW RSGVPPILFL NLLWLSSLPI 180
181 ARRHFYEIFL QLHWILAVGF YISLFYHVYP ELNSHMYLVA TIVVWFAQLF YRLAVK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| hydrogen ion transmembrane transporter activity | 6.63598598376927 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 5.19676916929792 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 5.11036789264445 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 4.7380339483684 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 4.70584841199534 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 4.14430124170869 | bayes_pls_golite062009 |
| transporter activity | 3.25025513931324 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.15068691999889 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.88166365184739 | bayes_pls_golite062009 |
| binding | 0.727993437899833 | bayes_pls_golite062009 |
| catalytic activity | 0.573177797781864 | bayes_pls_golite062009 |
| protein binding | 0.0725249103002593 | bayes_pls_golite062009 |
|
Region A: Residues: [315-413] |
1 11 21 31 41 51
| | | | | |
1 GYLRPGRSFM ASTIANVSIV GEGCVELIVK DVEMAYSPGQ HIFVRTIDKG IISNHPFSIF 60
61 PSAKYPGGIK MLIRAQKGFS KRLYESNDDM KKILIDGPY
|
| Detection Method: | |
| Confidence: | 55.69897 |
| Match: | 1cnf__ |
| Description: | Nitrate reductase core domain; Nitrate reductase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.911136919465112 | bayes_pls_golite062009 |
| binding | 0.671794680287713 | bayes_pls_golite062009 |
|
Region A: Residues: [414-553] |
1 11 21 31 41 51
| | | | | |
1 GGIERDIRSF TNVYLICSGS GISTCLPFLQ KYGPILHKTN LEVITLDWVV RHREDISWIR 60
61 DEMCTLSNNL RQLFLDGKIV VRIYVCSDST VPGIIKTFPQ TIDTASDQSD LAKREKDTEF 120
121 GQDDTESNST FDKSNNEYKG
|
| Detection Method: | |
| Confidence: | 55.69897 |
| Match: | 1cnf__ |
| Description: | Nitrate reductase core domain; Nitrate reductase |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [554-629] |
1 11 21 31 41 51
| | | | | |
1 LITIIPSKPD LNQVINDYQI GFRNCFICSG SDSLRYTVGN SVAVYRPRFF LTKMSKSAIY 60
61 TARVLATSRK QMASTM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
