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Protein Overview: RBOHD_ARATH

General Information:
Name(s) found: RBOHD_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Respiratory burst oxidase homolog protein D OS=Arabidopsis thaliana GN=RBOHD PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 921 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: oxygen and reactive oxygen species metabolic process [IMP][TAS]
    response to heat [IMP]
    negative regulation of programmed cell death [IGI]
    defense response [IMP]
    defense response to fungus [IMP]
    Molecular Function: NAD(P)H oxidase activity [IMP][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMRRGNSSN DHELGILRGA NSDTNSDTES IASDRGAFSG PLGRPKRASK KNARFADDLP  60
   61 KRSNSVAGGR GDDDEYVEIT LDIRDDSVAV HSVQQAAGGG GHLEDPELAL LTKKTLESSL 120
  121 NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA 180
  181 AWPAVDQRFD KLSADSNGLL LSAKFWECLG MNKESKDFAD QLFRALARRN NVSGDAITKE 240
  241 QLRIFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE 300
  301 YAALIMEELD PDNAGFIMIE NLEMLLLQAP NQSVRMGDSR ILSQMLSQKL RPAKESNPLV 360
  361 RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN KAAYGVMGYC VCVAKGGAET 420
  421 LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK VIASGIVVGV LLHAGAHLTC 480
  481 DFPRLIAADE DTYEPMEKYF GDQPTSYWWF VKGVEGWTGI VMVVLMAIAF TLATPWFRRN 540
  541 KLNLPNFLKK LTGFNAFWYT HHLFIIVYAL LIVHGIKLYL TKIWYQKTTW MYLAVPILLY 600
  601 ASERLLRAFR SSIKPVKMIK VAVYPGNVLS LHMTKPQGFK YKSGQFMLVN CRAVSPFEWH 660
  661 PFSITSAPGD DYLSVHIRTL GDWTRKLRTV FSEVCKPPTA GKSGLLRADG GDGNLPFPKV 720
  721 LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKGPDRDSD IENNNSNNNS 780
  781 KGFKTRKAYF YWVTREQGSF EWFKGIMDEI SELDEEGIIE LHNYCTSVYE EGDARVALIA 840
  841 MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKKIAVQH PGKRIGVFYC GMPGMIKELK 900
  901 NLALDFSRKT TTKFDFHKEN F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..158] PSI-BLAST 5.0 No description for 2cn5A was found.
    2 View Details [159..340] PSI-BLAST 42.69897 Structure of calmodulin bound to a calcineurin peptide: a new way of making an old binding mode
    3 View Details [341..489] deduced N/A No confident structure predictions are available.
    4 View Details [490..921] PSI-BLAST 50.69897 Flavohemoglobin, N-terminal domain; Flavohemoglobin, central domain; Flavohemoglobin, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • oxidoreductase activity
    		•  3.63104057348215 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  3.51215695612257 bayes_pls_golite062009
  • NADH dehydrogenase (ubiquinone) activity
    		•  3.16088106136981 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, heme protein as acceptor
    		•  3.111558299994 bayes_pls_golite062009
  • oxygen binding
    		•  3.00647431286466 bayes_pls_golite062009
  • riboflavin synthase activity
    		•  2.93302227890511 bayes_pls_golite062009
  • transporter activity
    		•  2.82854186201092 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.74894673967321 bayes_pls_golite062009
  • NADH dehydrogenase activity
    		•  2.39225626523677 bayes_pls_golite062009
  • NADH dehydrogenase (quinone) activity
    		•  2.34041929019601 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  2.2317814267351 bayes_pls_golite062009
  • FAD binding
    		•  2.07600122867642 bayes_pls_golite062009
  • oxygen transporter activity
    		•  1.78021144232114 bayes_pls_golite062009
  • coenzyme binding
    		•  1.66552102285114 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.59457655213395 bayes_pls_golite062009
  • signal transducer activity
    		•  1.59457655213395 bayes_pls_golite062009
  • cytochrome-b5 reductase activity
    		•  1.5685421124725 bayes_pls_golite062009
  • cofactor binding
    		•  1.53717310937468 bayes_pls_golite062009
  • catalytic activity
    		•  1.45374095556065 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, with oxygen as acceptor
    		•  1.39469367242077 bayes_pls_golite062009
  • binding
    		•  1.33256635332573 bayes_pls_golite062009
  • protein binding
    		•  1.29518074303313 bayes_pls_golite062009
  • NADP or NADPH binding
    		•  1.18833847639357 bayes_pls_golite062009
  • receptor activity
    		•  0.977817619616883 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  0.90349352746963 bayes_pls_golite062009
  • FMN binding
    		•  0.649158247260553 bayes_pls_golite062009
  • antioxidant activity
    		•  0.46048982927229 bayes_pls_golite062009
  • oxidoreductase activity, acting on peroxide as acceptor
    		•  0.431171115433616 bayes_pls_golite062009
  • peroxidase activity
    		•  0.431171115433616 bayes_pls_golite062009
  • NAD(P)H oxidase activity
    		•  0.270721094503631 bayes_pls_golite062009
  • transferase activity
    		•  0.00498326987177106 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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