| Protein: | HAL9 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1030 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HAL9.
| Description | E-value | Query Range |
Subject Range |
|
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0.0 | [1..1030] | [1..1030] |
|
|
2.0E-86 | [90..801] | [7..635] |
|
|
4.0E-86 | [62..804] | [1..653] |
|
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7.0E-82 | [83..780] | [1..645] |
|
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1.0E-76 | [101..804] | [7..616] |
|
Region A: Residues: [1-111] |
1 11 21 31 41 51
| | | | | |
1 MENQGGDYSP NGFSNSASNM NAVFNNEITG RSDISNVNHQ TGTPRLVPET QIWSMPVPDQ 60
61 LMTMPNRENT LMTGSTIGPN IPMNVAYPNT IYSPTEHQSQ FQTQQNRDIS T
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.391 | 0.362 | transcription initiation from RNA polymerase II promoter | a.74.1 | Cyclin-like |
| View | Download | 0.307 | 0.271 | response to salt stress | a.3.1 | Cytochrome c |
| View | Download | 0.209 | 0.033 | response to salt stress | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.350 | 0.018 | response to salt stress | a.24.4 | Hemerythrin |
| View | Download | 0.391 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.350 | N/A | N/A | a.24.4 | Hemerythrin |
| View | Download | 0.209 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
|
Region A: Residues: [112-193] |
1 11 21 31 41 51
| | | | | |
1 MMEHTNSNDM SGSGKNLKKR VSKACDHCRK RKIRCDEVDQ QTKKCSNCIK FQLPCTFKHR 60
61 DEILKKKRKL EIKHHATPGE SL
|
| Detection Method: | |
| Confidence: | 29.37734 |
| Match: | 2alcA_ |
| Description: | Ethanol regulon transcriptional activator ALCR DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.56444258780502 | bayes_pls_golite062009 |
| DNA binding | 4.01653715768897 | bayes_pls_golite062009 |
| nucleic acid binding | 3.75642497789214 | bayes_pls_golite062009 |
| binding | 3.44246337929443 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.93914501897006 | bayes_pls_golite062009 |
| transcription factor activity | 2.84476696728644 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 2.44382866473054 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.79090232026007 | bayes_pls_golite062009 |
| transcription activator activity | 0.915626626047549 | bayes_pls_golite062009 |
|
Region A: Residues: [194-284] |
1 11 21 31 41 51
| | | | | |
1 QTSNSISNPV ASSSVPNSGR FELLNGNSPL ESNIIDKVSN IQNNLNKKMN SKIEKLDRKM 60
61 SYIIDSVARL EWLLDKAVKK QEGKYKEKNN L
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.830 | 0.057 | response to salt stress | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.787 | 0.057 | response to salt stress | a.47.2 | t-snare proteins |
| View | Download | 0.720 | 0.057 | response to salt stress | a.60.8 | HRDC-like |
| View | Download | 0.757 | 0.057 | response to salt stress | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.734 | 0.057 | response to salt stress | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.636 | 0.057 | response to salt stress | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.588 | 0.057 | response to salt stress | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.587 | 0.057 | response to salt stress | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.571 | 0.057 | response to salt stress | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.537 | 0.057 | response to salt stress | a.60.2 | RuvA domain 2-like |
| View | Download | 0.506 | 0.057 | response to salt stress | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.463 | 0.057 | response to salt stress | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.441 | 0.057 | response to salt stress | a.2.3 | Chaperone J-domain |
| View | Download | 0.439 | 0.057 | response to salt stress | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.435 | 0.057 | response to salt stress | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.422 | 0.057 | response to salt stress | a.2.3 | Chaperone J-domain |
| View | Download | 0.422 | 0.057 | response to salt stress | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.412 | 0.057 | response to salt stress | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.405 | 0.057 | response to salt stress | a.7.1 | Spectrin repeat |
| View | Download | 0.399 | 0.057 | response to salt stress | a.2.7 | tRNA-binding arm |
| View | Download | 0.381 | 0.057 | response to salt stress | a.4.3 | ARID-like |
| View | Download | 0.365 | 0.057 | response to salt stress | a.118.1 | ARM repeat |
| View | Download | 0.361 | 0.057 | response to salt stress | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.355 | 0.057 | response to salt stress | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.350 | 0.057 | response to salt stress | a.118.8 | TPR-like |
| View | Download | 0.347 | 0.057 | response to salt stress | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.339 | 0.057 | response to salt stress | d.6.1 | Prion-like |
| View | Download | 0.327 | 0.057 | response to salt stress | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.325 | 0.057 | response to salt stress | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.324 | 0.057 | response to salt stress | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.319 | 0.057 | response to salt stress | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.312 | 0.057 | response to salt stress | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.309 | 0.057 | response to salt stress | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.303 | 0.057 | response to salt stress | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.299 | 0.057 | response to salt stress | d.109.2 | C-terminal, gelsolin-like domain of Sec23/24 |
| View | Download | 0.298 | 0.057 | response to salt stress | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.298 | 0.057 | response to salt stress | a.4.1 | Homeodomain-like |
| View | Download | 0.296 | 0.057 | response to salt stress | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.290 | 0.057 | response to salt stress | a.2.7 | tRNA-binding arm |
| View | Download | 0.287 | 0.057 | response to salt stress | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.286 | 0.057 | response to salt stress | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.284 | 0.057 | response to salt stress | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.278 | 0.057 | response to salt stress | a.2.3 | Chaperone J-domain |
| View | Download | 0.277 | 0.057 | response to salt stress | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.276 | 0.057 | response to salt stress | a.2.7 | tRNA-binding arm |
| View | Download | 0.276 | 0.057 | response to salt stress | a.118.9 | ENTH/VHS domain |
| View | Download | 0.275 | 0.057 | response to salt stress | a.118.8 | TPR-like |
| View | Download | 0.274 | 0.057 | response to salt stress | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.269 | 0.057 | response to salt stress | a.47.2 | t-snare proteins |
| View | Download | 0.262 | 0.057 | response to salt stress | a.3.1 | Cytochrome c |
| View | Download | 0.261 | 0.057 | response to salt stress | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.260 | 0.057 | response to salt stress | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.258 | 0.057 | response to salt stress | a.118.14 | FliG |
| View | Download | 0.254 | 0.057 | response to salt stress | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.252 | 0.057 | response to salt stress | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.252 | 0.057 | response to salt stress | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.252 | 0.057 | response to salt stress | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.243 | 0.057 | response to salt stress | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.243 | 0.057 | response to salt stress | a.65.1 | Annexin |
| View | Download | 0.241 | 0.057 | response to salt stress | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.241 | 0.057 | response to salt stress | d.201.1 | SRP19 |
| View | Download | 0.240 | 0.057 | response to salt stress | a.24.4 | Hemerythrin |
| View | Download | 0.239 | 0.057 | response to salt stress | a.7.7 | BAG domain |
| View | Download | 0.233 | 0.057 | response to salt stress | b.55.1 | PH domain-like |
| View | Download | 0.233 | 0.057 | response to salt stress | a.24.3 | Cytochromes |
| View | Download | 0.231 | 0.057 | response to salt stress | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.216 | 0.057 | response to salt stress | a.118.8 | TPR-like |
| View | Download | 0.216 | 0.057 | response to salt stress | a.4.3 | ARID-like |
| View | Download | 0.216 | 0.057 | response to salt stress | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.215 | 0.057 | response to salt stress | a.4.1 | Homeodomain-like |
| View | Download | 0.214 | 0.057 | response to salt stress | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.212 | 0.057 | response to salt stress | a.26.1 | 4-helical cytokines |
| View | Download | 0.210 | 0.057 | response to salt stress | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.207 | 0.057 | response to salt stress | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.205 | 0.057 | response to salt stress | a.30.1 | ROP protein |
| View | Download | 0.202 | 0.057 | response to salt stress | a.47.2 | t-snare proteins |
| View | Download | 0.201 | 0.057 | response to salt stress | a.28.1 | ACP-like |
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Region A: Residues: [285-581] |
1 11 21 31 41 51
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1 PKPARKIYST ALLTAQKLYW FKQSLGVKAS NEEFLSPISE ILSISLKWYA TQMKKFMDLS 60
61 SPAFFSSEII LYSLPPKKQA KRLLENFHAT LLSSVTGIIS LKECLDLAEK YYSESGEKLT 120
121 YPEHLLLNVC LCSGASATQS IIRGDSKFLR KDRYDPTSQE LKKIENVALL NAMYYYHKLS 180
181 TICSGTRTLQ ALLLLNRYFQ LTYDTELANC ILGTAIRLAV DMELNRKSSY KSLDFEEAIR 240
241 RRRMWWHCFC TDKLYSLMLS RPPIVGERDM DMLTDQNYYE VIKTNILPDL IDKKEDL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
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Region A: Residues: [582-806] |
1 11 21 31 41 51
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1 DKITDVNSAL NVVVNFCQHI SLFISYYVSK LVSIESKIYS TCFAVRSTLD LSFDAMLDKI 60
61 KDLNDSLNNW RDNLHVSMKL KSYKQYLSVL YAQKSQENPA LSFEIACSRV LNCHFRALYS 120
121 KVILSMMTTS LLIDNERLYK GSRHDIPQLF ILFSSQYLNA SKEMLQLFQG INYQAHMYNE 180
181 VMYQFSTAMF VLFFYVVDNM NDLKKKGEVK EIIDILKKSY DRLVG
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [807-1030] |
1 11 21 31 41 51
| | | | | |
1 ENDEQLLFDN VKWNTLIVFY SHFLKYVLQR YHALNDSTSI FDSKPYDETI TKVIMHSRKI 60
61 KDETVDQLIM SLKSYGSLHS LQKGNEADLA DDGLNTNDIS SEDFAEEAPI NLFGELSVEI 120
121 LKLLKSHSPI SNFGDLSPSS NRKGISDDSS LYPIRSDLTS LVYPIHSSDT GDTLSSGLET 180
181 PENSNFNSDS GIKEDFEAFR ALLPLGKLIY DRDYSFVNTF RDYE
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [849-1030] |
1 11 21 31 41 51
| | | | | |
1 SKPYDETITK VIMHSRKIKD ETVDQLIMSL KSYGSLHSLQ KGNEADLADD GLNTNDISSE 60
61 DFAEEAPINL FGELSVEILK LLKSHSPISN FGDLSPSSNR KGISDDSSLY PIRSDLTSLV 120
121 YPIHSSDTGD TLSSGLETPE NSNFNSDSGI KEDFEAFRAL LPLGKLIYDR DYSFVNTFRD 180
181 YE
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
