| Protein: | BRX1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 291 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BRX1.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-81 | [1..291] | [1..291] |
|
|
5.0E-75 | [1..286] | [1..292] |
|
|
1.0E-74 | [10..286] | [32..310] |
|
|
2.0E-72 | [3..284] | [2..296] |
|
|
2.0E-69 | [1..290] | [1..324] |
|
|
6.0E-66 | [49..286] | [1..228] |
|
|
1.0E-63 | [2..286] | [34..315] |
|
Region A: Residues: [1-230] |
1 11 21 31 41 51
| | | | | |
1 MSSIYKALAG KSKDNKSEKK QGNVKQFMNK QRTLLISSRG VNYRHRHLIQ DLSGLLPHSR 60
61 KEPKLDTKKD LQQLNEIAEL YNCNNVLFFE ARKHQDLYLW LSKPPNGPTI KFYIQNLHTM 120
121 DELNFTGNCL KGSRPVLSFD QRFESSPHYQ LIKELLVHNF CVPPNARKSK PFIDHVMSFS 180
181 IVDDKIWVRT YEISHSTKNK EEYEDGEEDI SLVEIGPRFV MTVILILEGS
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| aminoacyl-tRNA ligase activity | 3.87211694771248 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 3.87184649959884 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 3.87184649959884 | bayes_pls_golite062009 |
| ligase activity | 2.64230127203047 | bayes_pls_golite062009 |
| proline-tRNA ligase activity | 2.35871952544841 | bayes_pls_golite062009 |
| binding | 1.78917266819015 | bayes_pls_golite062009 |
| catalytic activity | 0.902495165806215 | bayes_pls_golite062009 |
| protein binding | 0.665778090365515 | bayes_pls_golite062009 |
|
Region A: Residues: [231-291] |
1 11 21 31 41 51
| | | | | |
1 FGGPKIYENK QYVSPNVVRA QIKQQAAEEA KSRAEAAVER KIKRRENVLA ADPLSNDALF 60
61 K
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.542 | a.2.3 | Chaperone J-domain |
| View | Download | 0.441 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.472 | a.2.7 | tRNA-binding arm |
| View | Download | 0.430 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.533 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.429 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.422 | a.30.1 | ROP protein |
| View | Download | 0.414 | a.46.1 | Methionine synthase domain |
| View | Download | 0.354 | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.328 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.317 | d.6.1 | Prion-like |
| View | Download | 0.314 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.300 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.299 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.278 | a.2.3 | Chaperone J-domain |
| View | Download | 0.276 | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.274 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.264 | a.24.4 | Hemerythrin |
| View | Download | 0.240 | a.2.7 | tRNA-binding arm |
| View | Download | 0.227 | a.2.9 | C-terminal UvrC-binding domain of UvrB |
| View | Download | 0.217 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.213 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.210 | a.64.1 | Saposin |
| View | Download | 0.203 | a.118.11 | Cytochrome c oxidase subunit E |
