| Protein: | PFA3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 336 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PFA3.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-88 | [1..336] | [1..336] |
|
|
8.0E-52 | [5..324] | [17..301] |
|
|
1.0E-51 | [12..278] | [21..286] |
|
|
2.0E-51 | [12..277] | [22..286] |
|
|
1.0E-49 | [12..277] | [24..293] |
|
Region A: Residues: [1-82] |
1 11 21 31 41 51
| | | | | |
1 MNDRLSLTSL FPRCLTTCLY IWTAYITLTR IHQIPRWFLA LTIVPTLAVA LYTYYKVIAR 60
61 GPGSPLDFPD LLVHDLKAAE NG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| histone acetyltransferase activity | 2.27787208911046 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 2.27787208911046 | bayes_pls_golite062009 |
| binding | 2.26426010117912 | bayes_pls_golite062009 |
| protein binding | 1.53664633945707 | bayes_pls_golite062009 |
| transcription regulator activity | 1.14293461071656 | bayes_pls_golite062009 |
| DNA binding | 1.01821892002729 | bayes_pls_golite062009 |
| nucleic acid binding | 0.868529388780493 | bayes_pls_golite062009 |
| phosphoinositide binding | 0.812614536174423 | bayes_pls_golite062009 |
| phospholipid binding | 0.681239636602955 | bayes_pls_golite062009 |
| N-acyltransferase activity | 0.565596821175093 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 0.514633973697725 | bayes_pls_golite062009 |
| histone binding | 0.440372329067948 | bayes_pls_golite062009 |
| 0.308979985902751 | bayes_pls_golite062009 | |
| transcription factor activity | 0.204306775436268 | bayes_pls_golite062009 |
| ligase activity | 0.161281682592326 | bayes_pls_golite062009 |
|
Region A: Residues: [83-178] |
1 11 21 31 41 51
| | | | | |
1 LELPPEYMSK RCLTLKHDGR FRVCQVCHVW KPDRCHHCSS CDVCILKMDH HCPWFAECTG 60
61 FRNQKFFIQF LMYTTLYAFL VLIYTCYELG TWFNSG
|
| Detection Method: | |
| Confidence: | 37.481486 |
| Match: | PF01529 |
| Description: | DHHC zinc finger domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.586 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.558 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.554 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.515 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.482 | N/A | N/A | a.118.8 | TPR-like |
|
Region A: Residues: [179-336] |
1 11 21 31 41 51
| | | | | |
1 SFNRELIDFH LLGVALLAVA VFISVLAFTC FSIYQVCKNQ TTIEVHGMRR YRRDLEILND 60
61 SYGTNEHLEN IFDLGSSMAN WQDIMGTSWL EWILPIETFK YKKSKHTKDE KGLYFNVRPQ 120
121 VQDRLLSSRC LEDQLLRRVT PRPSLEADRA SVEIIDAN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.558 | 0.216 | fungal-type vacuole | a.25.1 | Ferritin-like |
| View | Download | 0.482 | 0.074 | fungal-type vacuole | a.118.8 | TPR-like |
| View | Download | 0.586 | 0.052 | fungal-type vacuole | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.554 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.515 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.469 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.449 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.441 | N/A | N/A | a.149.1 | RNase III endonuclease catalytic domain |
| View | Download | 0.416 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.415 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.405 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.385 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.383 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.382 | N/A | N/A | a.24.12 | Outer surface protein C (OspC) |
| View | Download | 0.378 | N/A | N/A | f.18.1 | F1F0 ATP synthase subunit A |
| View | Download | 0.378 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.366 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.366 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.359 | N/A | N/A | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.355 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.353 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.345 | N/A | N/A | a.24.12 | Outer surface protein C (OspC) |
| View | Download | 0.337 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.336 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.322 | N/A | N/A | d.123.1 | Sporulation responce regulatory protein Spo0B |
| View | Download | 0.322 | N/A | N/A | a.168.1 | GEF domain of SopE toxin |
| View | Download | 0.319 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.316 | N/A | N/A | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.312 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.312 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.301 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.297 | N/A | N/A | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.290 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.278 | N/A | N/A | f.18.1 | F1F0 ATP synthase subunit A |
| View | Download | 0.274 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.271 | N/A | N/A | f.1.5 | Exotoxin A, middle domain |
| View | Download | 0.268 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.264 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.245 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.245 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.244 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.244 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.235 | N/A | N/A | a.79.1 | Antitermination factor NusB |
| View | Download | 0.231 | N/A | N/A | a.18.1 | T4 endonuclease V |
| View | Download | 0.229 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.221 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.220 | N/A | N/A | d.135.1 | The spindle assembly checkpoint protein mad2 |
| View | Download | 0.219 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.219 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.218 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.211 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.209 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.209 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.201 | N/A | N/A | c.23.1 | CheY-like |
| View | Download | 0.200 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
