| Protein: | DMA2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 522 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DMA2.
| Description | E-value | Query Range |
Subject Range |
|
|
215.0 | [0..9] | [478..245] |
|
|
208.0 | [0..96] | [484..1] |
|
|
182.0 | [0..22] | [482..117] |
|
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180.0 | [0..27] | [483..146] |
|
|
177.0 | [0..2] | [484..167] |
|
Region A: Residues: [1-234] |
1 11 21 31 41 51
| | | | | |
1 MYTPIPANTP APTAPTSSMT SNSSSASNAN TTSSSGINPR NRASGTPSNE RARPASGISS 60
61 FLNTFGIRQN SQTASSSAAP DQRLFGTTPS NSHMSVAMES IDTAPQQQEP RLHHPIQMPL 120
121 SAQFHVHRNY QLPISISLTA PTTTDHQQSS AHNFEGNNVG NVQESLNQRQ PNGTNNTTTS 180
181 IISMAPAATT RNIVGGADGS TIVNNSQEMY KNLRHLIYAA NQPNGTEILH LDLP
|
| Detection Method: |  |
| Confidence: | 13.71 |
| Match: | |
| Description: | No description for 1ldvA was found. |
|
Region A: Residues: [235-305] |
1 11 21 31 41 51
| | | | | |
1 ATSAEESNNM FNVDEVTLKQ RKDKHGLFSI RLTPFIDSSS TTNQGLFFEP IIRKAGPGSQ 60
61 LVIGRYTERV R
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.432 | b.34.5 | Translation proteins SH3-like domain |
| View | Download | 0.432 | b.34.5 | Translation proteins SH3-like domain |
| View | Download | 0.421 | d.129.6 | Description not found. |
| View | Download | 0.372 | a.60.16 | Description not found. |
| View | Download | 0.356 | c.51.3 | B12-dependend dehydatases associated subunit |
| View | Download | 0.355 | b.34.5 | Translation proteins SH3-like domain |
| View | Download | 0.306 | d.58.24 | CheY-binding domain of CheA |
| View | Download | 0.289 | d.74.3 | RBP11-like subunits of RNA polymerase |
|
Region A: Residues: [306-408] |
1 11 21 31 41 51
| | | | | |
1 DAISKIPEQY HPVVFKSKVV SRTHGCFKVD SQGNWYIKDV KSSSGTFLNH QRLSPASSLS 60
61 KDTPLRDGDI LQLGMDFRGG TEEIYRCVRM RIELNRSWKL KAN
|
| Detection Method: | |
| Confidence: | 11.24 |
| Match: | |
| Description: | No description for 1g3gA was found. |
|
Region A: Residues: [409-522] |
1 11 21 31 41 51
| | | | | |
1 SFNKEALQRL QNLQKLTTGI EEEDCSICLC KIKPCQAIFI SPCAHSWHFR CVRRLVMLSY 60
61 PQFVCPNCRS SCDLEASFES SDEEDESDVE SEGDQLVDQL SVLMETSKDV DSHP
|
| Detection Method: | |
| Confidence: | 6.30103 |
| Match: | 1chcA |
| Description: | STRUCTURE OF THE C3HC4 DOMAIN BY 1H-NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; A NEW STRUCTURAL CLASS OF ZINC-FINGER |
Matching Structure (courtesy of the PDB): |
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