| Protein: | FKH2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 862 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FKH2.
| Description | E-value | Query Range |
Subject Range |
|
|
408.0 | [0..1] | [440..1] |
|
|
228.0 | [0..26] | [655..5] |
|
|
218.0 | [0..154] | [833..356] |
|
|
212.0 | [0..7] | [683..33] |
|
|
203.0 | [0..295] | [861..578] |
|
|
201.0 | [0..202] | [660..218] |
|
|
200.0 | [0..46] | [688..2] |
|
|
192.0 | [0..228] | [746..2] |
|
Region A: Residues: [1-214] |
1 11 21 31 41 51
| | | | | |
1 MSSSNFNEMN ELNMTQTNYG STKYTAQHHQ GVINAIISSL TAPDQPTTVS LQYSNDKNMA 60
61 TEIQAYAKLS GPNWTYYVKD LEVSIGRNTD PLNSALQENS DGVKNSYRVN IDLGPAKVVS 120
121 RKHAIIKYNM NIGGWELHIL GRNGAKVNFQ RTHNGPNNPP IRLSSGTLLD IGGTQMMFIL 180
181 PDSDPVVAPI CIEHLMPNLI NMFGLEGNNN PLLR
|
| Detection Method: |  |
| Confidence: | 12.16 |
| Match: | |
| Description: | No description for 1g3gA was found. |
|
Region A: Residues: [215-337] |
1 11 21 31 41 51
| | | | | |
1 DIIKQSNYAK QRQLTSNQQI KGFKLYGSGG NAPFGSGANL GPSEQGIFNN NNNSKNKNGY 60
61 FTSINPNYTA STTTSNTINP QAASPQGPPN TIIAANFVDS YKSSNAYPQA LDFTSDLSHD 120
121 ENR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.521 | d.82.2 | Frataxin-like |
| View | Download | 0.521 | d.82.2 | Frataxin-like |
| View | Download | 0.372 | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.363 | d.20.1 | UBC-like |
| View | Download | 0.329 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.329 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.322 | a.118.1 | ARM repeat |
| View | Download | 0.286 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.277 | d.113.1 | Nudix |
| View | Download | 0.266 | d.20.1 | UBC-like |
|
Region A: Residues: [338-430] |
1 11 21 31 41 51
| | | | | |
1 NVKPPHSYAT MITQAILSSP EGVISLADIY KYISSNYAYY RFAKSGWQNS IRHNLSLNKA 60
61 FEKVPRRPNE PGKGMKWRIS ESYQQEFLNK WNT
|
| Detection Method: | |
| Confidence: | 217.9897 |
| Match: | 1d5vA |
| Description: | Adipocyte-transcription factor FREAC-11 (s12, fkh-14) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [431-862] |
1 11 21 31 41 51
| | | | | |
1 GKVGKIRRGS SVARQLQLHM AKFNSLPMEM DYRLSLNMAQ PPKRQLQSHN VLEPSNNNII 60
61 EGFVQHVPSK GNLPASQQSQ PPVSHQNQSQ QPPPQEQRQE IQFTFADTQN RNIALARPIK 120
121 TPQLQAPNSN ANLNQNNMKE YKESLHPPAI SISQMNRQSP NNALVSFTNA CANSKIINNI 180
181 SDSADKSTNN NGGTKMNLPA ISTSSLDENG NLEPTTTTSS GNSNSVPQTG TTTSSLAANS 240
241 LRLSQPYDTL LRSPTKAFHI TAMEAYTPER GSANRARSPL HSNSNNTNNN GANNSNLQTS 300
301 GMENKQTGLV LDSNVLKSME SNNDNRRLTP STSKSQNVKS SPGVWNLLQF SSTNNTPAAD 360
361 SGGNKRGFSI NPDIKAKENE NATSEKDSDS NSNDLETKDI NSSPLKNQGG STANAKELIL 420
421 DTDGAKISII NN
|
| Detection Method: | |
| Confidence: | 11.22 |
| Match: | |
| Description: | No description for 1i3qA was found. |
