Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YMR031C.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [3..838] | [997..1799] |
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0.0 | [3..838] | [998..1800] |
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0.0 | [3..838] | [14..816] |
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0.0 | [3..838] | [1003..1805] |
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0.0 | [3..838] | [999..1801] |
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0.0 | [3..838] | [1000..1802] |
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Region A: Residues: [1-381] |
1 11 21 31 41 51
| | | | | |
1 MSLISAVEDR DIHNIGKTSG GGSRTSSITS SKKSLKHGSK SLRKPKVYQT TGEPLSREAL 60
61 YKAKLKYGVY QSPAQSYSIG VSDAHAASDK AANLAHDNQT TVEAYKRMFI DPNATKAASK 120
121 MGPKVVRNNS ITSATSKTSK ESQTKRKSKE SPGAAASKAY SMTMETTSLS SQTNSRSYSI 180
181 TSASSVLSGA SGSFNSTVNP KPKTLNLEKV LVGAEKKAES RIKERWEPEK TNFQYGVKTD 240
241 EHGNLNQFSF SNEMMNNIMA KVDAPKAQDL QKVKKVSAEK EAKSMKFALG AANAVKDMHP 300
301 GEDIDKSIAL KAQKRETYLS QLTSQQVLTL ARANVDRQLD IIEKSDMHRK LFTNMEYNKA 360
361 AVAVAQSNHQ KKTEFHNKIN M
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
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Region A: Residues: [382-445] |
1 11 21 31 41 51
| | | | | |
1 GGGLFLSPED ITKIASGLIS PVLGEVSERA EAQRAMDEEI AERTEAYNKS SNEWETMERS 60
61 IISN
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.807 | 0.196 | cytoplasm | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.794 | 0.196 | cytoplasm | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.759 | 0.196 | cytoplasm | a.30.1 | ROP protein |
| View | Download | 0.654 | 0.196 | cytoplasm | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.707 | 0.196 | cytoplasm | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.599 | 0.196 | cytoplasm | a.2.9 | C-terminal UvrC-binding domain of UvrB |
| View | Download | 0.528 | 0.196 | cytoplasm | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.512 | 0.196 | cytoplasm | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.504 | 0.196 | cytoplasm | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.498 | 0.196 | cytoplasm | a.64.1 | Saposin |
| View | Download | 0.494 | 0.196 | cytoplasm | a.2.7 | tRNA-binding arm |
| View | Download | 0.492 | 0.196 | cytoplasm | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.472 | 0.196 | cytoplasm | a.2.7 | tRNA-binding arm |
| View | Download | 0.467 | 0.196 | cytoplasm | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.449 | 0.196 | cytoplasm | a.112.1 | Description not found. |
| View | Download | 0.441 | 0.196 | cytoplasm | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.394 | 0.196 | cytoplasm | a.65.1 | Annexin |
| View | Download | 0.378 | 0.196 | cytoplasm | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.368 | 0.196 | cytoplasm | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.364 | 0.196 | cytoplasm | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.344 | 0.196 | cytoplasm | a.126.1 | Serum albumin-like |
| View | Download | 0.342 | 0.196 | cytoplasm | g.2.2 | Neurotoxin B-IV |
| View | Download | 0.337 | 0.196 | cytoplasm | a.5.2 | UBA-like |
| View | Download | 0.336 | 0.196 | cytoplasm | a.2.1 | GreA transcript cleavage protein, N-terminal domain |
| View | Download | 0.333 | 0.196 | cytoplasm | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.310 | 0.196 | cytoplasm | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.307 | 0.196 | cytoplasm | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.306 | 0.196 | cytoplasm | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.305 | 0.196 | cytoplasm | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.290 | 0.196 | cytoplasm | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.281 | 0.196 | cytoplasm | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.276 | 0.196 | cytoplasm | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.250 | 0.196 | cytoplasm | a.7.8 | GAT domain |
| View | Download | 0.247 | 0.196 | cytoplasm | a.64.1 | Saposin |
| View | Download | 0.247 | 0.196 | cytoplasm | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.238 | 0.196 | cytoplasm | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.238 | 0.196 | cytoplasm | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.229 | 0.196 | cytoplasm | a.4.1 | Homeodomain-like |
| View | Download | 0.226 | 0.196 | cytoplasm | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.224 | 0.196 | cytoplasm | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.224 | 0.196 | cytoplasm | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.220 | 0.196 | cytoplasm | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.215 | 0.196 | cytoplasm | a.4.1 | Homeodomain-like |
| View | Download | 0.211 | 0.196 | cytoplasm | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.211 | 0.196 | cytoplasm | a.2.3 | Chaperone J-domain |
| View | Download | 0.210 | 0.196 | cytoplasm | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.209 | 0.196 | cytoplasm | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.207 | 0.196 | cytoplasm | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.206 | 0.196 | cytoplasm | a.4.12 | TrpR-like |
| View | Download | 0.203 | 0.196 | cytoplasm | a.3.1 | Cytochrome c |
| View | Download | 0.202 | 0.196 | cytoplasm | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.201 | 0.196 | cytoplasm | e.20.1 | Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment |
| Term | Confidence | Notes |
| binding | 1.21996214365885 | bayes_pls_golite062009 |
| transcription regulator activity | 1.17665418880398 | bayes_pls_golite062009 |
| DNA binding | 1.07598753330232 | bayes_pls_golite062009 |
| nucleic acid binding | 1.03922880212908 | bayes_pls_golite062009 |
| transcription factor activity | 0.497219747270883 | bayes_pls_golite062009 |
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Region A: Residues: [446-843] |
1 11 21 31 41 51
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1 DAKVLTTTAN RHQTEKKTSQ EKIKASFDAL VARMDTKVAE RETLLEDTKS KEIEFKKQMQ 60
61 QELKDEKARL DQDLEEWGKK CEQDITEARK EQEELLKPYH DDLANAEAEH KTLVEERDEI 120
121 NAEISRLQDA IVDHKRKISG YGNDLDAQKN RNIREDDKLL ELGQTKESLE SHLNDDVIIL 180
181 ANKAKEQAEL STKEARLKQL EVDSLINERK SELNATEIEL KKEKLNLLEA MKDVASARGD 240
241 DKIDEEKVKK LIGMTSEEYL TQNKSVEKNV EDLPTQLEKI EEGDELKKEE IVGAETKNSG 300
301 GDGVPVSTAA KEATETSSAV QTKEPEEKIS IGNKSSGKED ANDCKSAEHS KEISVSQKAG 360
361 NNKSLGVSPD SLEHTFSGFS QGSSIEDDQD AISNQEKK
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| Detection Method: | |
| Confidence: | 44.616428 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [517-843] |
1 11 21 31 41 51
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1 QDLEEWGKKC EQDITEARKE QEELLKPYHD DLANAEAEHK TLVEERDEIN AEISRLQDAI 60
61 VDHKRKISGY GNDLDAQKNR NIREDDKLLE LGQTKESLES HLNDDVIILA NKAKEQAELS 120
121 TKEARLKQLE VDSLINERKS ELNATEIELK KEKLNLLEAM KDVASARGDD KIDEEKVKKL 180
181 IGMTSEEYLT QNKSVEKNVE DLPTQLEKIE EGDELKKEEI VGAETKNSGG DGVPVSTAAK 240
241 EATETSSAVQ TKEPEEKISI GNKSSGKEDA NDCKSAEHSK EISVSQKAGN NKSLGVSPDS 300
301 LEHTFSGFSQ GSSIEDDQDA ISNQEKK
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| Detection Method: | |
| Confidence: | 13.221849 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
| Matching Structure (courtesy of the PDB): |
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