| Protein: | CAC2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 468 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAC2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [5..463] | [833..1268] |
|
|
0.0 | [3..467] | [938..1380] |
|
Region A: Residues: [1-48] |
1 11 21 31 41 51
| | | | | |
1 MEASHLQIYW HDSQPVYSLT FQKNSANDKL FTAGGDNKVR IWKLNRDE
|
| Detection Method: |  |
| Confidence: | 5.0 |
| Match: | PF00400 |
| Description: | WD domain, G-beta repeat |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 2.79445416141967 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| transcription regulator activity | 2.3610959773142 | bayes_pls_golite062009 |
| nucleic acid binding | 2.30918780727915 | bayes_pls_golite062009 |
| transcription repressor activity | 2.29049708962212 | bayes_pls_golite062009 |
| dynein binding | 1.74989209255308 | bayes_pls_golite062009 |
| DNA binding | 1.71685536470455 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.41752877005447 | bayes_pls_golite062009 |
| protein binding | 1.21879977456466 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.19593750149343 | bayes_pls_golite062009 |
| transcription factor activity | 1.08768505897883 | bayes_pls_golite062009 |
| 0.88172763425403 | bayes_pls_golite062009 | |
| histone binding | 0.685319917508843 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.625780732991652 | bayes_pls_golite062009 |
| actin binding | 0.529861581509437 | bayes_pls_golite062009 |
| transcription factor binding | 0.489473003915035 | bayes_pls_golite062009 |
| snoRNA binding | 0.347797037104681 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.30761651528651 | bayes_pls_golite062009 |
| DNA helicase activity | 0.220747580531792 | bayes_pls_golite062009 |
| structural molecule activity | 0.0936365746095786 | bayes_pls_golite062009 |
|
Region A: Residues: [49-468] |
1 11 21 31 41 51
| | | | | |
1 NGQNGGVRKI ESLDFLGSLT HHEQAINVIR FNSKGDVLAS AGDDGQVLLW KQEDPNTQQE 60
61 SVVRPFGMDA ETSEADENKE KWVVWKRLRG GSGATAAAEI YDLAWSPDNR NIVVACMDNS 120
121 IRLFDVGAGM LVCGQSDHGH YVQGVAWDPL NQFILSQSAD RSLHVYGVIL SSAGVVTGLK 180
181 LRSKIAKAEL PCPGDVLRTN YLFHNETLPS FFRRCSISPC GGLVVIPSGV YKVAGDEVAN 240
241 CVYVYTRSGI LNSAGGVKNR PAIRIPSLKK PALMAAFSPV FYETCQKSVL KLPYKLVFAI 300
301 ATTNEVLVYD TDVLEPLCVV GNIHYSPITD LAWSEDGSTL LISSTDGFCS YVSIDTETQF 360
361 GSRIEPPAMH AEPLDTDESA VAAKNQREAG GIVNMLPVKK IPCNSSDSKK RRIHPTPVDL 420
421
|
| Detection Method: | |
| Confidence: | 78.491979 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
