| Protein: | MAG2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 670 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAG2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..670] | [1..670] |
|
|
1.0E-97 | [1..536] | [1..564] |
|
|
1.0E-68 | [3..512] | [12..519] |
|
|
2.0E-57 | [3..376] | [35..382] |
|
|
6.0E-54 | [3..369] | [35..380] |
|
Region A: Residues: [1-148] |
1 11 21 31 41 51
| | | | | |
1 MVEPDMQKKA SGGSGGSEMD TLNATSNSSK QGVSNNKRNP VSKKKPGNKV SDGRDNAHNY 60
61 HGEGRRKSSK QQRSRTPYKE TSTRINDQDI DLSIQEEILG GNFKLRGRKT QVSINHLLNF 120
121 QLPEVEREKS RSSSSKKSNR RRDEHVHL
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.274 | 0.015 | DNA dealkylation involved in DNA repair | c.53.1 | Resolvase-like |
| View | Download | 0.274 | N/A | N/A | c.53.1 | Resolvase-like |
|
Region A: Residues: [149-276] |
1 11 21 31 41 51
| | | | | |
1 HGDTFVNVNY RLLVDDRFDY PEQNCNPNVP VDQEKILRVI VPKGQNCSIC LSEEPVAPRM 60
61 VTCGHIFCLS CLLNFFSIEE TVKNKETGYS KKKKYKECPL CGSIIGPKRV KPVLYEDDFD 120
121 VTRLNQKP
|
| Detection Method: | |
| Confidence: | 4.221849 |
| Match: | 1jm7B_ |
| Description: | bard1 RING domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.768717508465717 | bayes_pls_golite062009 |
| protein binding | 0.38968855779244 | bayes_pls_golite062009 |
|
Region A: Residues: [277-314] |
1 11 21 31 41 51
| | | | | |
1 EPGATVHLQL MCKPHGSLLP LPVALHLDPL KCGNFPPA
|
| Detection Method: | |
| Confidence: | 2.09691 |
| Match: | 1fre__ |
| Description: | Nuclear factor XNF7 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [315-493] |
1 11 21 31 41 51
| | | | | |
1 NLGSIKHYAH IMKCGVSYSL ELYQKDIVAI QEQYEIDKAI YNDSGKFVKQ SIENINDQIS 60
61 TLLAATTDLS PLSNDINNGL DNFHFDDDLL TKYDDSSAYF FYQTLVASST KYFLSPLDVK 120
121 ILLTIFHYYS KFPESIETTV ENIHYDTVVT EQLIRRYKYI GHLPIGTEIA LLDLDWRKI
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [494-670] |
1 11 21 31 41 51
| | | | | |
1 PFLPKEIYEQ FAHELKQRRR KFTMKKQKED KEKKLYEKRL EQEHAEFYRK ENGNSLKFED 60
61 SVQMATHYES IVSSSIPLNS LGISMLGPPT NSCSTPQKQA PSHTKRTIWG TSIAVTEDEK 120
121 ASKENKEFQD MLLQRIRQED SSDVTDSTDS PPTSNGKRGR KKKGKVMLFS SNHQALG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.419 | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.403 | d.110.4 | SNARE-like |
| View | Download | 0.386 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.351 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.347 | d.109.1 | Actin depolymerizing proteins |
