| Protein: | SFP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 683 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SFP1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [55..682] | [200..813] |
|
|
0.0 | [44..681] | [248..870] |
|
Region A: Residues: [1-113] |
1 11 21 31 41 51
| | | | | |
1 MDFTTMTMAS NMATSTTTTA TSAHASINSS SNFNIDIDSN QNTPSILINN NSDSSNGKNT 60
61 DFNGVNNIHQ KNIMNNTNNV HLYSPNIMDQ TLLTPQDIAK LRRESIAHSQ GMG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.525 | 0.011 | nucleus | d.95.2 | Homing endonucleases |
| View | Download | 0.942 | 0.011 | nucleus | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| View | Download | 0.516 | 0.011 | nucleus | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.487 | 0.011 | nucleus | d.199.1 | DNA-binding C-terminal domain of the transcription factor MotA |
| View | Download | 0.942 | 0.011 | nucleus | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| View | Download | 0.555 | 0.011 | nucleus | d.198.2 | Arp2/3 complex subunits |
| View | Download | 0.555 | 0.011 | nucleus | d.198.2 | Arp2/3 complex subunits |
| View | Download | 0.531 | 0.011 | nucleus | d.198.2 | Arp2/3 complex subunits |
| View | Download | 0.525 | 0.011 | nucleus | d.95.2 | Homing endonucleases |
| View | Download | 0.516 | 0.011 | nucleus | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.454 | 0.011 | nucleus | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.454 | 0.011 | nucleus | b.55.1 | PH domain-like |
| View | Download | 0.416 | 0.011 | nucleus | d.106.1 | Sterol carrier protein, SCP |
| View | Download | 0.367 | 0.011 | nucleus | d.95.2 | Homing endonucleases |
| View | Download | 0.353 | 0.011 | nucleus | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.351 | 0.011 | nucleus | d.198.2 | Arp2/3 complex subunits |
| View | Download | 0.349 | 0.011 | nucleus | d.129.3 | Bet v1-like |
| View | Download | 0.346 | 0.011 | nucleus | d.131.1 | DNA clamp |
| View | Download | 0.339 | 0.011 | nucleus | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.337 | 0.011 | nucleus | b.85.2 | Head decoration protein D (gpD, major capsid protein D) |
| View | Download | 0.333 | 0.011 | nucleus | d.93.1 | SH2 domain |
| View | Download | 0.330 | 0.011 | nucleus | b.1.1 | Immunoglobulin |
| View | Download | 0.330 | 0.011 | nucleus | d.21.1 | Diaminopimelate epimerase-like |
| View | Download | 0.319 | 0.011 | nucleus | d.198.1 | Type III secretory system chaperone |
| View | Download | 0.314 | 0.011 | nucleus | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.305 | 0.011 | nucleus | d.74.5 | Hypothetical protein Yml108w |
| View | Download | 0.301 | 0.011 | nucleus | a.22.1 | Histone-fold |
| View | Download | 0.301 | 0.011 | nucleus | b.60.1 | Lipocalins |
| View | Download | 0.300 | 0.011 | nucleus | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.294 | 0.011 | nucleus | a.39.1 | EF-hand |
| View | Download | 0.289 | 0.011 | nucleus | b.60.1 | Lipocalins |
| View | Download | 0.286 | 0.011 | nucleus | b.55.1 | PH domain-like |
| View | Download | 0.278 | 0.011 | nucleus | b.1.18 | E set domains |
| View | Download | 0.274 | 0.011 | nucleus | b.55.1 | PH domain-like |
| View | Download | 0.270 | 0.011 | nucleus | c.23.16 | Class I glutamine amidotransferase-like |
| View | Download | 0.268 | 0.011 | nucleus | b.60.1 | Lipocalins |
| View | Download | 0.262 | 0.011 | nucleus | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.260 | 0.011 | nucleus | a.4.3 | ARID-like |
| View | Download | 0.254 | 0.011 | nucleus | b.82.3 | cAMP-binding domain-like |
| View | Download | 0.253 | 0.011 | nucleus | d.192.1 | YlxR-like |
| View | Download | 0.252 | 0.011 | nucleus | b.1.10 | Clathrin adaptor appendage domain |
| View | Download | 0.250 | 0.011 | nucleus | c.98.1 | MurE/MurF N-terminal domain |
| View | Download | 0.250 | 0.011 | nucleus | c.45.1 | (Phosphotyrosine protein) phosphatases II |
| View | Download | 0.246 | 0.011 | nucleus | b.1.2 | Fibronectin type III |
| View | Download | 0.244 | 0.011 | nucleus | a.77.1 | DEATH domain |
| View | Download | 0.238 | 0.011 | nucleus | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.232 | 0.011 | nucleus | a.74.1 | Cyclin-like |
| View | Download | 0.229 | 0.011 | nucleus | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.223 | 0.011 | nucleus | d.74.4 | Prokaryotic AspRS, insert domain |
| View | Download | 0.222 | 0.011 | nucleus | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.205 | 0.011 | nucleus | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.205 | 0.011 | nucleus | c.55.3 | Ribonuclease H-like |
| View | Download | 0.203 | 0.011 | nucleus | a.1.1 | Globin-like |
|
Region A: Residues: [114-323] |
1 11 21 31 41 51
| | | | | |
1 GVSWGSISVG SWLRDEIISR RNSIVPASAN GAASAAASAT TTATNTLQIQ QPTKRPSVSN 60
61 PPYHRGYSIS PQIAYTAYLP NLEKQYCKDY SCCGLSLPGL HDLLRHYEEA HISTSPNTTN 120
121 MSQIPMNSAG NTSSSVRMTN NTSSANYNLQ NNMAANTKNA GHKTNTMQAH SSNATNNTSI 180
181 NNMHANLQSN MDSNSTIRQS QHPHHQQNII
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| transcription regulator activity | 4.47951889934838 | bayes_pls_golite062009 |
| DNA binding | 4.06558617622942 | bayes_pls_golite062009 |
| nucleic acid binding | 3.94726902110129 | bayes_pls_golite062009 |
| transcription factor activity | 3.0829185849524 | bayes_pls_golite062009 |
| binding | 2.99742524370422 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.05542379535543 | bayes_pls_golite062009 |
| transcription activator activity | 1.97757778483124 | bayes_pls_golite062009 |
| transcription repressor activity | 1.44763794968807 | bayes_pls_golite062009 |
| transcription factor binding | 1.23738346570539 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.18927065676691 | bayes_pls_golite062009 |
| chromatin binding | 1.14387291281112 | bayes_pls_golite062009 |
| protein binding | 0.952480850696098 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.668979099236657 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.627794176881836 | bayes_pls_golite062009 |
| catalytic activity | 0.263007611601737 | bayes_pls_golite062009 |
|
Region A: Residues: [324-434] |
1 11 21 31 41 51
| | | | | |
1 QQQLQSNSVN HTSGAVPTPS VMGSATASST TANPNVISIT GAPNSGLSMA NHSQQLHLNG 60
61 NLVDAVSTND VFLRTSNSPS RHVPHNKQIN SNNNSGININ NNTSHNSNIN M
|
| Detection Method: | |
| Confidence: | 28.69897 |
| Match: | 1meyG_ |
| Description: | Designed zinc finger protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [435-511] |
1 11 21 31 41 51
| | | | | |
1 GSKNAMVNRP HTFNNYSLNK TSRNPIQHQS RKIDPHQTDL SPLVLVQDID LSFMDDDILG 60
61 PSNHNSMNSV VNPTTGS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.306 | 0.359 | transcription factor activity | b.1.18 | E set domains |
| View | Download | 0.200 | 0.033 | transcription factor activity | a.4.2 | Methylated DNA-protein cysteine methyltransferase, C-terminal domain |
| View | Download | 0.213 | 0.016 | regulation of cell size | a.28.1 | ACP-like |
| View | Download | 0.306 | N/A | N/A | b.1.18 | E set domains |
| View | Download | 0.200 | N/A | N/A | a.4.2 | Methylated DNA-protein cysteine methyltransferase, C-terminal domain |
|
Region A: Residues: [512-589] |
1 11 21 31 41 51
| | | | | |
1 HNYNTFHSSV HAKSSQNMVE DQDIDDIDDD DDVDDDDDDD DDDDTENGSS SNGKSVHNNN 60
61 YKMPQQAYID DPARRLYV
|
| Detection Method: | |
| Confidence: | 48.39794 |
| Match: | 2gliA_ |
| Description: | Five-finger GLI1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.70988788192472 | bayes_pls_golite062009 |
| DNA binding | 4.31726585409267 | bayes_pls_golite062009 |
| nucleic acid binding | 4.18253042271426 | bayes_pls_golite062009 |
| transcription factor activity | 3.30488091451207 | bayes_pls_golite062009 |
| binding | 3.10743787485868 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.31369346002275 | bayes_pls_golite062009 |
| transcription activator activity | 2.19952417915035 | bayes_pls_golite062009 |
| transcription repressor activity | 1.64349785387632 | bayes_pls_golite062009 |
| chromatin binding | 1.41340072049908 | bayes_pls_golite062009 |
| transcription factor binding | 1.39608963544799 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.35040510840599 | bayes_pls_golite062009 |
| protein binding | 1.00484935878505 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.94201971474109 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.77874411480713 | bayes_pls_golite062009 |
| catalytic activity | 0.245893663605433 | bayes_pls_golite062009 |
|
Region A: Residues: [590-683] |
1 11 21 31 41 51
| | | | | |
1 MDHEEQKPFK CPVIGCEKTY KNQNGLKYHR LHGHQNQKLH ENPDGTFSVI DPDSTDSFGD 60
61 GMGSAKDKPY RCEVCGKRYK NLNGLKYHRG HSTH
|
| Detection Method: | |
| Confidence: | 48.39794 |
| Match: | 2gliA_ |
| Description: | Five-finger GLI1 |
| Matching Structure (courtesy of the PDB): |
|
