| Protein: | EST2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 884 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EST2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..884] | [1..884] |
|
|
0.0 | [196..872] | [342..1103] |
|
|
0.0 | [196..872] | [342..1103] |
|
|
0.0 | [196..872] | [347..1093] |
|
|
0.0 | [158..872] | [310..1099] |
|
|
0.0 | [147..872] | [338..1162] |
|
|
0.0 | [34..823] | [29..821] |
|
|
0.0 | [57..819] | [80..908] |
|
Region A: Residues: [1-301] |
1 11 21 31 41 51
| | | | | |
1 MKILFEFIQD KLDIDLQTNS TYKENLKCGH FNGLDEILTT CFALPNSRKI ALPCLPGDLS 60
61 HKAVIDHCII YLLTGELYNN VLTFGYKIAR NEDVNNSLFC HSANVNVTLL KGAAWKMFHS 120
121 LVGTYAFVDL LINYTVIQFN GQFFTQIVGN RCNEPHLPPK WVQRSSSSSA TAAQIKQLTE 180
181 PVTNKQFLHK LNINSSSFFP YSKILPSSSS IKKLTDLREA IFPTNLVKIP QRLKVRINLT 240
241 LQKLLKRHKR LNYVSILNSI CPPLEGTVLD LSHLSRQSPK ERVLKFIIVI LQKLLPQEMF 300
301 G
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [302-584] |
1 11 21 31 41 51
| | | | | |
1 SKKNKGKIIK NLNLLLSLPL NGYLPFDSLL KKLRLKDFRW LFISDIWFTK HNFENLNQLA 60
61 ICFISWLFRQ LIPKIIQTFF YCTEISSTVT IVYFRHDTWN KLITPFIVEY FKTYLVENNV 120
121 CRNHNSYTLS NFNHSKMRII PKKSNNEFRI IAIPCRGADE EEFTIYKENH KNAIQPTQKI 180
181 LEYLRNKRPT SFTKIYSPTQ IADRIKEFKQ RLLKKFNNVL PELYFMKFDV KSCYDSIPRM 240
241 ECMRILKDAL KNENGFFVRS QYFFNTNTGV LKLFNVVNAS RVP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [585-773] |
1 11 21 31 41 51
| | | | | |
1 KPYELYIDNV RTVHLSNQDV INVVEMEIFK TALWVEDKCY IREDGLFQGS SLSAPIVDLV 60
61 YDDLLEFYSE FKASPSQDTL ILKLADDFLI ISTDQQQVIN IKKLAMGGFQ KYNAKANRDK 120
121 ILAVSSQSDD DTVIQFCAMH IFVKELEVWK HSSTMNNFHI RSKSSKGIFR SLIALFNTRI 180
181 SYKTIDTNL
|
| Detection Method: | |
| Confidence: | 3.69897 |
| Match: | 1d0eA_ |
| Description: | MMLV reverse transcriptase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [774-884] |
1 11 21 31 41 51
| | | | | |
1 NSTNTVLMQI DHVVKNISEC YKSAFKDLSI NVTQNMQFHS FLQRIIEMTV SGCPITKCDP 60
61 LIEYEVRFTI LNGFLESLSS NTSKFKDNII LLRKEIQHLQ AYIYIYIHIV N
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.955 | 0.016 | telomerase holoenzyme complex | a.24.17 | Group V grass pollen allergen |
|
Region A: Residues: [583-747] |
1 11 21 31 41 51
| | | | | |
1 VPKPYELYID NVRTVHLSNQ DVINVVEMEI FKTALWVEDK CYIREDGLFQ GSSLSAPIVD 60
61 LVYDDLLEFY SEFKASPSQD TLILKLADDF LIISTDQQQV INIKKLAMGG FQKYNAKANR 120
121 DKILAVSSQS DDDTVIQFCA MHIFVKELEV WKHSSTMNNF HIRSK
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 1nndA |
| Description: | Arginine 116 is Essential for Nucleic Acid Recognition by the Fingers Domain of Moloney Murine Leukemia Virus Reverse Transcriptase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [748-884] |
1 11 21 31 41 51
| | | | | |
1 SSKGIFRSLI ALFNTRISYK TIDTNLNSTN TVLMQIDHVV KNISECYKSA FKDLSINVTQ 60
61 NMQFHSFLQR IIEMTVSGCP ITKCDPLIEY EVRFTILNGF LESLSSNTSK FKDNIILLRK 120
121 EIQHLQAYIY IYIHIVN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.955 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
