| Protein: | HAP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1502 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HAP1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1471] | [1..1471] |
|
|
4.0E-34 | [23..267] | [3..231] |
|
|
1.0E-29 | [1..218] | [1..195] |
|
|
2.0E-27 | [59..250] | [72..295] |
|
|
2.0E-27 | [1..218] | [1..196] |
|
Region A: Residues: [1-168] |
1 11 21 31 41 51
| | | | | |
1 MSNTPYNSSV PSIASMTQSS VSRSPNMHTA TTPGANTSSN SPPLHMSSDS SKIKRKRNRI 60
61 PLSCTICRKR KVKCDKLRPH CQQCTKTGVA HLCHYMEQTW AEEAEKELLK DNELKKLRER 120
121 VKSLEKTLSK VHSSPSSNSL KSYNTPESSN LFMGSDEHTT LVNANTGS
|
| Detection Method: |  |
| Confidence: | 463.770868 |
| Match: | 1hwtD_ |
| Description: | Hap1 (Cyp1); HAP1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.56444258780502 | bayes_pls_golite062009 |
| DNA binding | 4.26146437716972 | bayes_pls_golite062009 |
| nucleic acid binding | 4.17369933547911 | bayes_pls_golite062009 |
| transcription factor activity | 3.049435548132 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.98081393153291 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.93914501897006 | bayes_pls_golite062009 |
| binding | 2.91929847152301 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 2.44382866473054 | bayes_pls_golite062009 |
| transcription activator activity | 2.24483536326713 | bayes_pls_golite062009 |
|
Region A: Residues: [169-1502] |
1 11 21 31 41 51
| | | | | |
1 ASSASHMHQQ QQQQQQQEQQ QDFSRSANAN ANSSSLSISN KYDNDELDLT KDFDLLHIKS 60
61 NGTIHLGATH WLSIMKGDPY LKLLWGHIFA MREKLNEWYY QKNSYSKLKS SKCPINHAQA 120
121 PPSAAAAATR KCPVDHSAFS SGMVAPKEET PLPRKCPVDH TMFSSGMIPP REDTSSQKRC 180
181 PVDHTMYSAG MMPPKDETPS PFSTKAMIDH NKHTMNPPQS KCPVDHRNYM KDYPSDMANS 240
241 SSNPASRCPI DHSSMKNTAA LPASTHNTIP HHQPQSGSHA RSHPAQSRKH DSYMTESEVL 300
301 ATLCEMLPPK RVIALFIEKF FKHLYPAIPI LDEQNFKNHV NQMLSLSSMN PTVNNFGMSM 360
361 PSSSTLENQP ITQINLPKLS DSCNLGILII ILRLTWLSIP SNSCEVDLGE ESGSFLVPNE 420
421 SSNMSASALT SMAKEESLLL KHETPVEALE LCQKYLIKFD ELSSISNNNV NLTTVQFAIF 480
481 YNFYMKSASN DLTTLTNTNN TGMANPGHDS ESHQILLSNI TQMAFSCGLH RDPDNFPQLN 540
541 ATIPATSQDV SNNGSKKANP STNPTLNNNM SAATTNSSSR SGSADSRSGS NPVNKKENQV 600
601 SIERFKHTWR KIWYYIVSMD VNQSLSLGSP RLLRNLRDFS DTKLPSASRI DYVRDIKELI 660
661 IVKNFTLFFQ IDLCIIAVLN HILNVSLARS VRKFELDSLI NLLKNLTYGT ENVNDVVSSL 720
721 INKGLLPTSE GGSVDSNNDE IYGLPKLPDI LNHGQHNQNL YADGRNTSSS DIDKKLDLPH 780
781 ESTTRALFFS KHMTIRMLLY LLNYILFTHY EPMGSEDPGT NILAKEYAQE ALNFAMDGYR 840
841 NCMIFFNNIR NTNSLFDYMN VILSYPCLDI GHRSLQFIVC LILRAKCGPL TGMRESSIIT 900
901 NGTSSGFNSS VEDEDVKVKQ ESSDELKKDD FMKDVNLDSG DSLAEILMSR MLLFQKLTKQ 960
961 LSKKYNYAIR MNKSTGFFVS LLDTPSKKSD SKSGGSSFML GNWKHPKVSN MSGFLAGDKD1020
1021 QLQKCPVYQD ALGFVSPTGA NEGSAPMQGM SLQGSTARMG GTQLPPIRSY KPITYTSSNL1080
1081 RRMNETGEAE AKRRRFNDGY IDNNSNNDIP RGISPKPSNG LSSVQPLLSS FSMNQLNGGT1140
1141 IPTVPSLTNI TSQMGALPSL DRITTNQINL PDPSRDEAFD NSIKQMTPMT SAFMNANTTI1200
1201 PSSTLNGNMN MNGAGTANTD TSANGSALST LTSPQGSDLA SNSATQYKPD LEDFLMQNSN1260
1261 FNGLMINPSS LVEVVGGYND PNNLGRNDAV DFLPVDNVEI DGVGIKINYH LLTSIYVTSI1320
1321 LSYTVLEDDA NDEK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [202-283] |
1 11 21 31 41 51
| | | | | |
1 SSLSISNKYD NDELDLTKDF DLLHIKSNGT IHLGATHWLS IMKGDPYLKL LWGHIFAMRE 60
61 KLNEWYYQKN SYSKLKSSKC PI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [284-462] |
1 11 21 31 41 51
| | | | | |
1 NHAQAPPSAA AAATRKCPVD HSAFSSGMVA PKEETPLPRK CPVDHTMFSS GMIPPREDTS 60
61 SQKRCPVDHT MYSAGMMPPK DETPSPFSTK AMIDHNKHTM NPPQSKCPVD HRNYMKDYPS 120
121 DMANSSSNPA SRCPIDHSSM KNTAALPAST HNTIPHHQPQ SGSHARSHPA QSRKHDSYM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [463-710] |
1 11 21 31 41 51
| | | | | |
1 TESEVLATLC EMLPPKRVIA LFIEKFFKHL YPAIPILDEQ NFKNHVNQML SLSSMNPTVN 60
61 NFGMSMPSSS TLENQPITQI NLPKLSDSCN LGILIIILRL TWLSIPSNSC EVDLGEESGS 120
121 FLVPNESSNM SASALTSMAK EESLLLKHET PVEALELCQK YLIKFDELSS ISNNNVNLTT 180
181 VQFAIFYNFY MKSASNDLTT LTNTNNTGMA NPGHDSESHQ ILLSNITQMA FSCGLHRDPD 240
241 NFPQLNAT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [711-756] |
1 11 21 31 41 51
| | | | | |
1 IPATSQDVSN NGSKKANPST NPTLNNNMSA ATTNSSSRSG SADSRS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [757-891] |
1 11 21 31 41 51
| | | | | |
1 GSNPVNKKEN QVSIERFKHT WRKIWYYIVS MDVNQSLSLG SPRLLRNLRD FSDTKLPSAS 60
61 RIDYVRDIKE LIIVKNFTLF FQIDLCIIAV LNHILNVSLA RSVRKFELDS LINLLKNLTY 120
121 GTENVNDVVS SLINK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [892-1073] |
1 11 21 31 41 51
| | | | | |
1 GLLPTSEGGS VDSNNDEIYG LPKLPDILNH GQHNQNLYAD GRNTSSSDID KKLDLPHEST 60
61 TRALFFSKHM TIRMLLYLLN YILFTHYEPM GSEDPGTNIL AKEYAQEALN FAMDGYRNCM 120
121 IFFNNIRNTN SLFDYMNVIL SYPCLDIGHR SLQFIVCLIL RAKCGPLTGM RESSIITNGT 180
181 SS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1074-1266] |
1 11 21 31 41 51
| | | | | |
1 GFNSSVEDED VKVKQESSDE LKKDDFMKDV NLDSGDSLAE ILMSRMLLFQ KLTKQLSKKY 60
61 NYAIRMNKST GFFVSLLDTP SKKSDSKSGG SSFMLGNWKH PKVSNMSGFL AGDKDQLQKC 120
121 PVYQDALGFV SPTGANEGSA PMQGMSLQGS TARMGGTQLP PIRSYKPITY TSSNLRRMNE 180
181 TGEAEAKRRR FND
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1267-1387] |
1 11 21 31 41 51
| | | | | |
1 GYIDNNSNND IPRGISPKPS NGLSSVQPLL SSFSMNQLNG GTIPTVPSLT NITSQMGALP 60
61 SLDRITTNQI NLPDPSRDEA FDNSIKQMTP MTSAFMNANT TIPSSTLNGN MNMNGAGTAN 120
121 T
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1388-1456] |
1 11 21 31 41 51
| | | | | |
1 DTSANGSALS TLTSPQGSDL ASNSATQYKP DLEDFLMQNS NFNGLMINPS SLVEVVGGYN 60
61 DPNNLGRND
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1457-1502] |
1 11 21 31 41 51
| | | | | |
1 AVDFLPVDNV EIDGVGIKIN YHLLTSIYVT SILSYTVLED DANDEK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
