| Protein: | PEP3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 918 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEP3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..918] | [1..918] |
|
|
0.0 | [4..916] | [24..961] |
|
|
0.0 | [20..916] | [70..985] |
|
|
0.0 | [20..913] | [24..971] |
|
|
0.0 | [4..913] | [45..997] |
|
|
0.0 | [4..913] | [45..997] |
|
Region A: Residues: [1-304] |
1 11 21 31 41 51
| | | | | |
1 MIKTRIEEVQ LQFLTGNTEL THLKVSNDQL IVTTQRTIYR INLQDPAIVN HFDCPLSKEL 60
61 ETIMNVHVSP MGSVILIRTN FGRYMLLKDG EFTQLNKIKN LDLSSLHWIN ETTFLMGIKK 120
121 TPKLYRVELT GKDITTKLWY ENKKLSGGID GIAYWEGSLL LTIKDNILYW RDVTNMKFPL 180
181 VLPDESEQFE RLKHHAIKKF DSYNGLFAWV TSNGIVFGDL KEKQMEKDPA SNNFGKFLSS 240
241 SKVLLNFELP DYQNDKDHLI KDIVLTAFHI LLLRKNTVTM VSQLNNDVVF HETIPRHQLT 300
301 GSNT
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [305-823] |
1 11 21 31 41 51
| | | | | |
1 DSNEKFLGLV RDSVKETFWC FSNINVFEII IENEPNSVWN LLVRDNKFDK ALSLKGLTVR 60
61 EIESVKLSKA MYLFHTAKDF HSAAQTLGSM KDLSHFGEIA LNFLQIKDYN DLNVILIKQL 120
121 DNVPWKSTQV VLSSWIIWNF MKQLNDIELK INTTKPASTD EDNLLNWNLN LKEKSNELTK 180
181 FLESHLEKLD NETVYQIMSK QNRQNELLIF ASLINDMKFL LSFWIDQGNW YESLKILLTI 240
241 NNHDLVYKYS LILLLNSPEA TVSTWMKIKD LDPNKLIPTI LKFFTNWQNN SKLITNISEY 300
301 PENYSLTYLK WCVREVPKMC NPIVYNSILY MMITDPRNDM ILENDIIKFM KSNENKYDLN 360
361 FQLRLSLKFK KTKTSIFLLT RLNLFEDAID LALKNNLIDD CKVIVNDEIL IEDYKLRKRL 420
421 WLKIAKHLLL SMKDIDIKQL IRTILNDSNE ILTIKDLLPF FNEYTTIANL KEELIKFLEN 480
481 HNMKMNEISE DIINSKNLKV EINTEISKFN EIYRILEPG
|
| Detection Method: | |
| Confidence: | 21.30103 |
| Match: | 1b89A_ |
| Description: | Clathrin heavy chain proximal leg segment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [824-918] |
1 11 21 31 41 51
| | | | | |
1 KSCDECGKFL QIKKFIVFPC GHCFHWNCII RVILNSNDYN LRQKTENFLK AKSKHNLNDL 60
61 ENIIVEKCGL CSDININKID QPISIDETEL AKWNE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [816-918] |
1 11 21 31 41 51
| | | | | |
1 IYRILEPGKS CDECGKFLQI KKFIVFPCGH CFHWNCIIRV ILNSNDYNLR QKTENFLKAK 60
61 SKHNLNDLEN IIVEKCGLCS DININKIDQP ISIDETELAK WNE
|
| Detection Method: | |
| Confidence: | 1.57 |
| Match: | 2ecnA |
| Description: | No description for 2ecnA was found. |
