Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PET309.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [56..956] | [53..927] |
|
Region A: Residues: [1-692] |
1 11 21 31 41 51
| | | | | |
1 MKRCAPAVLR NYNYKKGIWS TGVPDHIRKL LRDKSTSPLC SQDERNLVSY FMARGSVPLK 60
61 SVGSGLTKKA TTSITSNSAT TTFERQYLIK YLYRHQAYGN VIKIAQKFLY TTIGSQRLLK 120
121 QDASLPELKK FLLSLLILQR GIQLDQAISD IIQRFLLTQK TMVIDLINSI FSRMVIMNMH 180
181 EEAVYKWVKW MKLVNGHCEF TNYMENKIVL RNFLSFMRQS NVRPDYLSYL KAIQLTQGPA 240
241 IASQFATTLL FLLTYIRKFS SAEAVWNYKC EHNLPIVSSD LTCILKTYCH MQKFNLVSST 300
301 YWKYPDAQHD QNQFDYLLVA HSRLHNWDAL QQQFNALFGI GKLPSIQHYG ILMYTMARIG 360
361 ELDSVNKLYT QLLRRGMIPT YAVLQSLLYA HYKVGDFAAC FSHFELFKKY DITPSTATHT 420
421 IMLKVYRGLN DLDGAFRILK RLSEDPSVEI TEGHFALLIQ MCCKTTNHLI AQELFNLMTE 480
481 HYNIQHTGKS ISALMDVYIE SNRPTEAIAL FEKHSKNLSW RDGLISVYNK AIKAYIGLRN 540
541 ANKCEELFDK ITTSKLAVNS EFYKMMIKFL VTLNEDCETA LSIIDQLIKH SVIKVDATHF 600
601 EIIMEAYDKE GYRDGIINLY KTMSQNKVPA NSKILYYILK AVAKKSLQNN EEIKETINMV 660
661 EDIMENAANG TLDVTYNKLH PSVMAWPMRM IV
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [693-824] |
1 11 21 31 41 51
| | | | | |
1 KHDSPQRALE LYNRYNELFF KKHDWISNNN KFVMMRSLLV LLAQIEQWKD FETLFAKYMD 60
61 RIENIENLPS STTPNIKLRS IFSGLFPYKV SQLIAMNKID ELPLLWKKLR EKGFILDNIS 120
121 WNSAVEALFK DP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.874 | 0.055 | aerobic respiration | a.118.8 | TPR-like |
|
Region A: Residues: [825-965] |
1 11 21 31 41 51
| | | | | |
1 RTLSYGMKIV DDTLIHGYNL IHKFRLLTKL SEDKTQSSDK SWPTLKMKEK EPNKFQPRLY 60
61 LKSDTYNSIM RQLDTYLDGI DDLKTLEDQV RDFISNYKYF MKDYLLMPRS KINKWEQIEM 120
121 RHLSYFKELR KSKRVLPVSK F
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [274-626] |
1 11 21 31 41 51
| | | | | |
1 LPIVSSDLTC ILKTYCHMQK FNLVSSTYWK YPDAQHDQNQ FDYLLVAHSR LHNWDALQQQ 60
61 FNALFGIGKL PSIQHYGILM YTMARIGELD SVNKLYTQLL RRGMIPTYAV LQSLLYAHYK 120
121 VGDFAACFSH FELFKKYDIT PSTATHTIML KVYRGLNDLD GAFRILKRLS EDPSVEITEG 180
181 HFALLIQMCC KTTNHLIAQE LFNLMTEHYN IQHTGKSISA LMDVYIESNR PTEAIALFEK 240
241 HSKNLSWRDG LISVYNKAIK AYIGLRNANK CEELFDKITT SKLAVNSEFY KMMIKFLVTL 300
301 NEDCETALSI IDQLIKHSVI KVDATHFEII MEAYDKEGYR DGIINLYKTM SQN
|
| Detection Method: | |
| Confidence: | 9.154902 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 2.67835748923436 | bayes_pls_golite062009 |
| binding | 2.29041171814244 | bayes_pls_golite062009 |
| transcription regulator activity | 1.36301889945421 | bayes_pls_golite062009 |
| nucleic acid binding | 1.04482640570705 | bayes_pls_golite062009 |
| DNA binding | 1.03582297487751 | bayes_pls_golite062009 |
| oxidoreductase activity | 0.967526235944614 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on NADH or NADPH | 0.853542267130676 | bayes_pls_golite062009 |
| signal transducer activity | 0.730941324269551 | bayes_pls_golite062009 |
| molecular transducer activity | 0.730941324269551 | bayes_pls_golite062009 |
| transcription activator activity | 0.628603889499786 | bayes_pls_golite062009 |
| receptor activity | 0.393899879588134 | bayes_pls_golite062009 |
| transcription factor activity | 0.39224150319016 | bayes_pls_golite062009 |
|
Region A: Residues: [627-807] |
1 11 21 31 41 51
| | | | | |
1 KVPANSKILY YILKAVAKKS LQNNEEIKET INMVEDIMEN AANGTLDVTY NKLHPSVMAW 60
61 PMRMIVKHDS PQRALELYNR YNELFFKKHD WISNNNKFVM MRSLLVLLAQ IEQWKDFETL 120
121 FAKYMDRIEN IENLPSSTTP NIKLRSIFSG LFPYKVSQLI AMNKIDELPL LWKKLREKGF 180
181 I
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.874 | a.118.8 | TPR-like |
|
Region A: Residues: [808-965] |
1 11 21 31 41 51
| | | | | |
1 LDNISWNSAV EALFKDPRTL SYGMKIVDDT LIHGYNLIHK FRLLTKLSED KTQSSDKSWP 60
61 TLKMKEKEPN KFQPRLYLKS DTYNSIMRQL DTYLDGIDDL KTLEDQVRDF ISNYKYFMKD 120
121 YLLMPRSKIN KWEQIEMRHL SYFKELRKSK RVLPVSKF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
