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Protein Overview: gi|15221621

General Information:
Name(s) found: gi|15221621 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|15221621|ref|NP_176479.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1133 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRSISLTAK RLFVHWNLQG IGNPPTVPSF FNLCGSGCWE RSFASASGDY REILRNRLSD  60
   61 IIKVDDAVDL FGDMVKSRPF PSIVEFNKLL SAVAKMNKFE LVISLGEQMQ TLGISHDLYT 120
  121 YSIFINCFCR RSQLSLALAV LAKMMKLGYE PDIVTLSSLL NGYCHSKRIS DAVALVDQMV 180
  181 EMGYKPDTFT FTTLIHGLFL HNKASEAVAL VDQMVQRGCQ PDLVTYGTVV NGLCKRGDID 240
  241 LALSLLKKME KGKIEADVVI YNTIIDGLCK YKHMDDALNL FTEMDNKGIR PDVFTYSSLI 300
  301 SCLCNYGRWS DASRLLSDMI ERKINPNVVT FSALIDAFVK EGKLVEAEKL YDEMIKRSID 360
  361 PDIFTYSSLI NGFCMHDRLD EAKHMFELMI SKDCFPNVVT YSTLIKGFCK AKRVEEGMEL 420
  421 FREMSQRGLV GNTVTYTTLI HGFFQARDCD NAQMVFKQMV SVGVHPNILT YNILLDGLCK 480
  481 NGKLAKAMVV FEYLQRSTME PDIYTYNIMI EGMCKAGKVE DGWELFCNLS LKGVSPNVIA 540
  541 YNTMISGFCR KGSKEEADSL LKKMKEDGPL PNSGTYNTLI RARLRDGDRE ASAELIKEMR 600
  601 SCGFAGDAST IGLSSKFKRE IEKPNRENAC KNIIFSEEIC SSESCGESYD YREVLRTGLS 660
  661 DIELDDAIGL FGVMAQSRPF PSIIEFSKLL SAIAKMNKFD LVISFGEKME ILGISHNLYT 720
  721 YNILINCFCR CSRLSLALAL LGKMMKLGYE PDIVTLNSLL NGFCHGNRIS DAVALVDQMV 780
  781 EMGYKPDTVT FTTLIHGLFL HNKASEAVAL IDRMVQRGCQ PDLVTYGAVV NGLCKRGDTD 840
  841 LALNLLNKME AAKIEANVVI YSTVIDSLCK YRHEDDALNL FTEMENKGVR PNVITYSSLI 900
  901 SCLCNYGRWS DASRLLSDMI ERKINPNLVT FSALIDAFVK KGKLVKAEKL YEEMIKRSID 960
  961 PNIFTYSSLI NGFCMLDRLG EAKQMLELMI RKDCLPNVVT YNTLINGFCK AKRVDKGMEL1020
 1021 FREMSQRGLV GNTVTYTTLI HGFFQARDCD NAQMVFKQMV SVGVHPNILT YNILLDGLCK1080
 1081 NGKLAKAMVV FEYLQRSTME PDIYTYNIMI EGMCKAGKWK MGGIYFVASA LKE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..151] PSI-BLAST 4.221849 No description for 2vyiA was found.
    2 View Details [152..270] deduced N/A No confident structure predictions are available.
    3 View Details [271..410] PSI-BLAST 4.39794 Clathrin heavy chain proximal leg segment
    4 View Details [411..1133] PSI-BLAST 12.154902 Clathrin D6 Coat


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle