| Protein: | gi|15221621 |
| Organism: | Arabidopsis thaliana |
| Length: | 1133 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15221621.
| Description | E-value | Query Range |
Subject Range |
|
|
820.0 | [0..189] | [1132..28] |
|
|
803.0 | [0..162] | [1106..45] |
|
|
802.0 | [0..52] | [1074..58] |
|
Region A: Residues: [1-151] |
1 11 21 31 41 51
| | | | | |
1 MQRSISLTAK RLFVHWNLQG IGNPPTVPSF FNLCGSGCWE RSFASASGDY REILRNRLSD 60
61 IIKVDDAVDL FGDMVKSRPF PSIVEFNKLL SAVAKMNKFE LVISLGEQMQ TLGISHDLYT 120
121 YSIFINCFCR RSQLSLALAV LAKMMKLGYE P
|
| Detection Method: |  |
| Confidence: | 4.221849 |
| Match: | 2vyiA |
| Description: | No description for 2vyiA was found. |
|
Region A: Residues: [152-270] |
1 11 21 31 41 51
| | | | | |
1 DIVTLSSLLN GYCHSKRISD AVALVDQMVE MGYKPDTFTF TTLIHGLFLH NKASEAVALV 60
61 DQMVQRGCQP DLVTYGTVVN GLCKRGDIDL ALSLLKKMEK GKIEADVVIY NTIIDGLCK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [271-410] |
1 11 21 31 41 51
| | | | | |
1 YKHMDDALNL FTEMDNKGIR PDVFTYSSLI SCLCNYGRWS DASRLLSDMI ERKINPNVVT 60
61 FSALIDAFVK EGKLVEAEKL YDEMIKRSID PDIFTYSSLI NGFCMHDRLD EAKHMFELMI 120
121 SKDCFPNVVT YSTLIKGFCK
|
| Detection Method: | |
| Confidence: | 4.39794 |
| Match: | 1b89A |
| Description: | Clathrin heavy chain proximal leg segment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [411-1133] |
1 11 21 31 41 51
| | | | | |
1 AKRVEEGMEL FREMSQRGLV GNTVTYTTLI HGFFQARDCD NAQMVFKQMV SVGVHPNILT 60
61 YNILLDGLCK NGKLAKAMVV FEYLQRSTME PDIYTYNIMI EGMCKAGKVE DGWELFCNLS 120
121 LKGVSPNVIA YNTMISGFCR KGSKEEADSL LKKMKEDGPL PNSGTYNTLI RARLRDGDRE 180
181 ASAELIKEMR SCGFAGDAST IGLSSKFKRE IEKPNRENAC KNIIFSEEIC SSESCGESYD 240
241 YREVLRTGLS DIELDDAIGL FGVMAQSRPF PSIIEFSKLL SAIAKMNKFD LVISFGEKME 300
301 ILGISHNLYT YNILINCFCR CSRLSLALAL LGKMMKLGYE PDIVTLNSLL NGFCHGNRIS 360
361 DAVALVDQMV EMGYKPDTVT FTTLIHGLFL HNKASEAVAL IDRMVQRGCQ PDLVTYGAVV 420
421 NGLCKRGDTD LALNLLNKME AAKIEANVVI YSTVIDSLCK YRHEDDALNL FTEMENKGVR 480
481 PNVITYSSLI SCLCNYGRWS DASRLLSDMI ERKINPNLVT FSALIDAFVK KGKLVKAEKL 540
541 YEEMIKRSID PNIFTYSSLI NGFCMLDRLG EAKQMLELMI RKDCLPNVVT YNTLINGFCK 600
601 AKRVDKGMEL FREMSQRGLV GNTVTYTTLI HGFFQARDCD NAQMVFKQMV SVGVHPNILT 660
661 YNILLDGLCK NGKLAKAMVV FEYLQRSTME PDIYTYNIMI EGMCKAGKWK MGGIYFVASA 720
721 LKE
|
| Detection Method: | |
| Confidence: | 12.154902 |
| Match: | 1xi4A |
| Description: | Clathrin D6 Coat |
Matching Structure (courtesy of the PDB): |
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