| Protein: | BRE2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 505 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BRE2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..505] | [1..505] |
|
|
0.0 | [46..499] | [306..619] |
|
|
4.0E-79 | [17..294] | [296..540] |
|
|
8.0E-79 | [17..294] | [291..535] |
|
Region A: Residues: [1-275] |
1 11 21 31 41 51
| | | | | |
1 MKLGIIPYQE GTDIVYKNAL QGQQEGKRPN LPQMEATHQI KSSVQGTSYE FVRTEDIPLN 60
61 RRHFVYRPCS ANPFFTILGY GCTEYPFDHS GMSVMDRSEG LSISRDGNDL VSVPDQYGWR 120
121 TARSDVCIKE GMTYWEVEVI RGGNKKFADG VNNKENADDS VDEVQSGIYE KMHKQVNDTP 180
181 HLRFGVCRRE ASLEAPVGFD VYGYGIRDIS LESIHEGKLN CVLENGSPLK EGDKIGFLLS 240
241 LPSIHTQIKQ AKEFTKRRIF ALNSHMDTMN EPWRE
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [276-505] |
1 11 21 31 41 51
| | | | | |
1 DAENGPSRKK LKQETTNKEF QRALLEDIEY NDVVRDQIAI RYKNQLFFEA TDYVKTTKPE 60
61 YYSSDKRERQ DYYQLEDSYL AIFQNGKYLG KAFENLKPLL PPFSELQYNE KFYLGYWQHG 120
121 EARDESNDKN TTSAKKKKQQ QKKKKGLILR NKYVNNNKLG YYPTISCFNG GTARIISEED 180
181 KLEYLDQIRS AYCVDGNSKV NTLDTLYKEQ IAEDIVWDII DELEQIALQQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 2.36160381896665 | bayes_pls_golite062009 |
| transcription regulator activity | 2.17920418295591 | bayes_pls_golite062009 |
| nucleic acid binding | 1.9830722589036 | bayes_pls_golite062009 |
| DNA binding | 1.82525586215701 | bayes_pls_golite062009 |
| transcription repressor activity | 1.26658862258675 | bayes_pls_golite062009 |
| transcription factor activity | 1.16784442642933 | bayes_pls_golite062009 |
| protein binding | 0.729859333703778 | bayes_pls_golite062009 |
| protein kinase activity | 0.358328289529296 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.155087758481234 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.020584443202555 | bayes_pls_golite062009 |
|
Region A: Residues: [293-505] |
1 11 21 31 41 51
| | | | | |
1 KEFQRALLED IEYNDVVRDQ IAIRYKNQLF FEATDYVKTT KPEYYSSDKR ERQDYYQLED 60
61 SYLAIFQNGK YLGKAFENLK PLLPPFSELQ YNEKFYLGYW QHGEARDESN DKNTTSAKKK 120
121 KQQQKKKKGL ILRNKYVNNN KLGYYPTISC FNGGTARIIS EEDKLEYLDQ IRSAYCVDGN 180
181 SKVNTLDTLY KEQIAEDIVW DIIDELEQIA LQQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
