| Protein: | YLL067C |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1205 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLL067C.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [120..1204] | [139..1187] |
|
|
0.0 | [120..1204] | [597..1645] |
|
Region A: Residues: [1-111] |
1 11 21 31 41 51
| | | | | |
1 MRTFTDFVSG APIVRSLQKS TIRRYGYNLA PHMFLLLHVD ELSIFSAYQA SLPGEKKVDT 60
61 ERLKRDLCPR KPIEIKYFSQ ICNDMMNKKD RLGDVLATAQ RIRRRYNKNG S
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.487 | 0.802 | helicase activity | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [112-624] |
1 11 21 31 41 51
| | | | | |
1 SEPRLKTLDG LTSERWIQWL GLESDYHCSF SSTRNAEDVV AGEAASSDHD QKISRVTRKR 60
61 PREPKSTNDI LVAGQKLFGS SFEFRDLHQL RLCHEIYMAD TPSVAVQAPP GYGKTELFHL 120
121 PLIALASKGD VKYVSFLFVP YTVLLANCMI RLGRCGCLNV APVRNFIEEG CDGVTDLYVG 180
181 IYDDLASTNF TDRIAAWENI VECTFRTNNV KLGYLIVDEF HNFETEVYRQ SQFGGITNLD 240
241 FDAFEKAIFL SGTAPEAVAD AALQRIGLTG LAKKSMDINE LKRSEDLSRG LSSYPTRMFN 300
301 LIKEKSEVPL GHVHKIWKKV ESQPEEALKL LLALFEIEPE SKAIVVASTT NEVEELACSW 360
361 RKYFRVVWIH GKLGAAEKVS RTKEFVTDGS MRVLIGTKLV TEGIDIKQLM MVIMLDNRLN 420
421 IIELIQGVGR LRDGGLCYLL SRKNSWAARN RKGELPPIKE GCITEQVREF YGLESKKGKK 480
481 GQHVGCCGSR TDLSADTVEL IERMDRLAEK QAT
|
| Detection Method: | |
| Confidence: | 167.0 |
| Match: | 1fuuA_ |
| Description: | Initiation factor 4a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.36550713198424 | bayes_pls_golite062009 |
| catalytic activity | 0.234613562021476 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.166100211611062 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.159702441149605 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.149170905385965 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.147838751017739 | bayes_pls_golite062009 |
| hydrolase activity | 0.0436758932827116 | bayes_pls_golite062009 |
|
Region A: Residues: [625-1028] |
1 11 21 31 41 51
| | | | | |
1 ASMSIVALPS SFQESNSSDR CRKYCSSDED SNTCIHGSAN ASTNATTNSS TNATTTASTN 60
61 VRTSATTTAS INVRTSATTT ESTNSSTNAT TTASTNVRTS ATTTASINVR TSATTTESTN 120
121 SNTSATTTES TDSNTSATTT ESTDSSTNAT TTASINVRTS ATTTESTNSN TNATTTESTN 180
181 SSTNATTTEG TNSNTSATTT ASTNSSTNAT TTESTNASAK EDANKDGNAE DNRFHPVTDI 240
241 NKESYKRKGS QMVLLERKKL KAQFPNTSEN MNVLQFLGFR SDEIKHLFLY GIDVYFCPEG 300
301 VFTQYGLCKG CQKMFELCVC WAGQKVSYRR MAWEALAVER MLRNDEEYKE YLEDIEPYHG 360
361 DPVGYLKFFS VKRGEIYSQI QRNYAWYLAI TRRRETISVL DSTR
|
| Detection Method: | |
| Confidence: | 14.86 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1029-1205] |
1 11 21 31 41 51
| | | | | |
1 GKQGSQVFRM SGRQIKELYY KVWSNLRESK TEVLQYFLNW DEKKCREEWE AKDDTVFVEA 60
61 LEKVGVFQRL RSMTSAGLQG PQYVKLQFSR HHRQLRSRYE LSLGMHLRDQ LALGVTPSKV 120
121 PHWTAFLSML IGLFYNKTFR QKLEYLLEQI SEVWLLPHWV DLANVEVLAA DNTRVPC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [893-1205] |
1 11 21 31 41 51
| | | | | |
1 ENMNVLQFLG FRSDEIKHLF LYGIDVYFCP EGVFTQYGLC KGCQKMFELC VCWAGQKVSY 60
61 RRMAWEALAV ERMLRNDEEY KEYLEDIEPY HGDPVGYLKF FSVKRGEIYS QIQRNYAWYL 120
121 AITRRRETIS VLDSTRGKQG SQVFRMSGRQ IKELYYKVWS NLRESKTEVL QYFLNWDEKK 180
181 CREEWEAKDD TVFVEALEKV GVFQRLRSMT SAGLQGPQYV KLQFSRHHRQ LRSRYELSLG 240
241 MHLRDQLALG VTPSKVPHWT AFLSMLIGLF YNKTFRQKLE YLLEQISEVW LLPHWVDLAN 300
301 VEVLAADNTR VPC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
