Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLL032C.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..825] | [1..825] |
|
|
1.0E-70 | [88..785] | [296..980] |
|
|
1.0E-70 | [88..748] | [296..914] |
|
|
3.0E-70 | [91..785] | [255..980] |
|
|
8.0E-66 | [81..785] | [244..981] |
|
|
1.0E-65 | [231..747] | [14..524] |
|
Region A: Residues: [1-141] |
1 11 21 31 41 51
| | | | | |
1 MDNFKIYSTV ITTAFLQVPH LYTTNRLWKP IEAPFLVEFL QKRISSKELK NTKAICHIDP 60
61 SWVNLNASFI RDDMISIKAT TDDMDLDAIC RISLPLPMNT NDLTAELEKM KRILLDLSEK 120
121 FNLELIITKE PAYFTPEQTG E
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.546 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.711 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.622 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.711 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.625 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.622 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.546 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.542 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.523 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.518 | b.7.1 | C2 domain (Calcium/lipid-binding domain, CaLB) |
| View | Download | 0.517 | a.118.8 | TPR-like |
| View | Download | 0.508 | b.60.1 | Lipocalins |
| View | Download | 0.502 | d.42.1 | POZ domain |
| View | Download | 0.502 | d.58.9 | RuBisCO, large subunit, small (N-terminal) domain |
| View | Download | 0.499 | d.58.19 | Bacterial exopeptidase dimerisation domain |
| View | Download | 0.478 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.475 | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.457 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.456 | a.3.1 | Cytochrome c |
| View | Download | 0.451 | c.110.1 | D-Tyr tRNAtyr deacylase, DTD |
| View | Download | 0.434 | a.1.1 | Globin-like |
| View | Download | 0.399 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.393 | a.25.1 | Ferritin-like |
| View | Download | 0.387 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.385 | a.25.1 | Ferritin-like |
| View | Download | 0.382 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.371 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.370 | d.118.1 | N-acetylmuramoyl-L-alanine amidase-like |
| View | Download | 0.367 | c.16.1 | Lumazine synthase |
| View | Download | 0.365 | d.3.1 | Cysteine proteinases |
| View | Download | 0.363 | a.1.1 | Globin-like |
| View | Download | 0.357 | a.1.1 | Globin-like |
| View | Download | 0.348 | c.16.1 | Lumazine synthase |
| View | Download | 0.342 | c.55.2 | Creatinase/prolidase N-terminal domain |
| View | Download | 0.335 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.333 | c.50.1 | Macro domain-like |
| View | Download | 0.327 | a.118.8 | TPR-like |
| View | Download | 0.310 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.302 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.283 | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.266 | a.167.1 | Porin chaperone SurA, peptide-binding domain |
| View | Download | 0.241 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.229 | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.223 | a.25.1 | Ferritin-like |
| View | Download | 0.215 | c.16.1 | Lumazine synthase |
| View | Download | 0.209 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.201 | d.2.1 | Lysozyme-like |
|
Region A: Residues: [142-358] |
1 11 21 31 41 51
| | | | | |
1 SKELCIYVHA LGFRSNLMEC EPQLLAFVDL IKKNGMTLPP QHYIIEPMEL NSYSVLPLYM 60
61 GVDMENFKHI SRAFKTSIYA PSLITLSRDL KANPQIFFSG AVHSLSLLAR KTLRESISVN 120
121 SKSFFYRRLT NITPGKLLFI RKYYQQKVNQ LILKYQSLIR VTNEYIEFQS ISTNLLEMVI 180
181 KNFTIQVLHE IVEVQISLNE NCAMSPELII DSFFGHT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| structural constituent of ribosome | 6.720012207401 | bayes_pls_golite062009 |
| structural molecule activity | 6.15496287636596 | bayes_pls_golite062009 |
| transcription regulator activity | 3.20568770944756 | bayes_pls_golite062009 |
| RNA binding | 1.82714562401326 | bayes_pls_golite062009 |
| binding | 1.5466198129438 | bayes_pls_golite062009 |
| nucleic acid binding | 1.48613196553259 | bayes_pls_golite062009 |
| translation initiation factor activity | 1.27539679024898 | bayes_pls_golite062009 |
| DNA binding | 0.99813295819535 | bayes_pls_golite062009 |
| mRNA binding | 0.871057743692364 | bayes_pls_golite062009 |
| transcription termination factor activity | 0.76362333646107 | bayes_pls_golite062009 |
| protein binding | 0.523813050066193 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 0.474251377131502 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 0.47336621289748 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 0.47336621289748 | bayes_pls_golite062009 |
| transcription factor activity | 0.184749183964367 | bayes_pls_golite062009 |
| catalytic activity | 0.10089766806364 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 6.9430052008157E-5 | bayes_pls_golite062009 |
|
Region A: Residues: [359-554] |
1 11 21 31 41 51
| | | | | |
1 GNQIVVITPK EDSFNQLIVV GNQSSTDEAS DTSILHYLSD FIMGSNQVIN PNLRQIKAIF 60
61 EIHPDFEDFI SGKKNGKLTR IMELSACLIQ LEMEEEDDNL YLNLVSDSFP DFKESFKNVI 120
121 NEFPAEESFF IPEVCHRPII GTGGSLIQAT MRKHNVFIQF SNSFNLPQNK ISMIRYDNVI 180
181 IRCPRKNKAN ICLAKN
|
| Detection Method: | |
| Confidence: | 14.69897 |
| Match: | 1e3pA_ |
| Description: | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3; S1 RNA-binding domain of polyribonucleotide phosphorylase, PNPase; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 1 and 4; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 4.53756130039297 | bayes_pls_golite062009 |
| mRNA binding | 4.29703395482722 | bayes_pls_golite062009 |
| nucleic acid binding | 3.71927111604413 | bayes_pls_golite062009 |
| binding | 3.03029468866374 | bayes_pls_golite062009 |
| transcription regulator activity | 1.39930706524977 | bayes_pls_golite062009 |
| DNA binding | 1.19211612853211 | bayes_pls_golite062009 |
| protein binding | 1.16541072642796 | bayes_pls_golite062009 |
| mRNA 3'-UTR binding | 0.496865429134247 | bayes_pls_golite062009 |
| transcription factor activity | 0.272268621092333 | bayes_pls_golite062009 |
| catalytic activity | 0.113112541746059 | bayes_pls_golite062009 |
|
Region A: Residues: [555-647] |
1 11 21 31 41 51
| | | | | |
1 DLKQIVQEYD SLQSKTLIRF SSGQYRHILH VNGQKNIIGQ IEKNENVYIM IPLKEPLDGT 60
61 SQLSIQGNDE NASRAANELV NSAFGYEYEF KID
|
| Detection Method: | |
| Confidence: | 19.69897 |
| Match: | 1j4wA_ |
| Description: | Far upstream binding element, FBP, KH3 and KH4 domains |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 4.53756130039297 | bayes_pls_golite062009 |
| mRNA binding | 4.29703395482722 | bayes_pls_golite062009 |
| nucleic acid binding | 3.71927111604413 | bayes_pls_golite062009 |
| binding | 3.03029468866374 | bayes_pls_golite062009 |
| transcription regulator activity | 1.39930706524977 | bayes_pls_golite062009 |
| DNA binding | 1.19211612853211 | bayes_pls_golite062009 |
| protein binding | 1.16541072642796 | bayes_pls_golite062009 |
| mRNA 3'-UTR binding | 0.496865429134247 | bayes_pls_golite062009 |
| transcription factor activity | 0.272268621092333 | bayes_pls_golite062009 |
| catalytic activity | 0.113112541746059 | bayes_pls_golite062009 |
|
Region A: Residues: [648-745] |
1 11 21 31 41 51
| | | | | |
1 QEIDPNKEYE FYNLIVVPFL QIMNIIVTFE KDLITFTFEK DTNENTLTKA IELLSNYLET 60
61 QKTKIIFKKI IKKFVLGSAS SKSNTSNSNT NGNFRSMN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.588 | 0.485 | cytoplasm | a.118.1 | ARM repeat |
| View | Download | 0.728 | 0.240 | cytoplasm | a.77.1 | DEATH domain |
| View | Download | 0.493 | 0.027 | cytoplasm | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.557 | 0.000 | cytoplasm | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.434 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.424 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.415 | N/A | N/A | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.406 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.405 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.403 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.358 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.354 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.353 | N/A | N/A | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.341 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.341 | N/A | N/A | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.333 | N/A | N/A | d.58.16 | Poly(A) polymerase, C-terminal domain |
| View | Download | 0.320 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.315 | N/A | N/A | d.58.49 | YajQ-like |
| View | Download | 0.296 | N/A | N/A | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.287 | N/A | N/A | a.66.1 | Transducin (alpha subunit), insertion domain |
| View | Download | 0.281 | N/A | N/A | d.58.43 | Mechanosensitive channel protein MscS (YggB), C-terminal domain |
| View | Download | 0.255 | N/A | N/A | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.254 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.242 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.239 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.238 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.230 | N/A | N/A | c.51.3 | B12-dependend dehydatases associated subunit |
| View | Download | 0.226 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.222 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.219 | N/A | N/A | a.118.14 | FliG |
| View | Download | 0.219 | N/A | N/A | d.197.1 | Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |
| View | Download | 0.212 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.208 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.201 | N/A | N/A | a.47.2 | t-snare proteins |
|
Region A: Residues: [746-825] |
1 11 21 31 41 51
| | | | | |
1 NAKSRTTIDN TSQSGASPQR HKMPVITTVG GAQAIKGYIP NTYYNGYGYG YGYTYEYDYN 60
61 YANSNKAQTN NRHKYQNGRK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.718 | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.699 | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.690 | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.687 | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.683 | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.639 | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.569 | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.551 | d.233.1 | Inhibitor of vertebrate lysozyme, Ivy |
| View | Download | 0.550 | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.545 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.535 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.511 | d.58.17 | Metal-binding domain |
| View | Download | 0.486 | b.101.1 | Ribonuclease domain of colicin E3 |
| View | Download | 0.484 | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.449 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.415 | b.55.1 | PH domain-like |
| View | Download | 0.414 | b.101.1 | Ribonuclease domain of colicin E3 |
| View | Download | 0.410 | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.410 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.402 | d.50.2 | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |
| View | Download | 0.394 | d.50.2 | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |
| View | Download | 0.394 | b.1.1 | Immunoglobulin |
| View | Download | 0.390 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.384 | b.40.6 | MOP-like |
| View | Download | 0.365 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.364 | d.58.17 | Metal-binding domain |
| View | Download | 0.364 | b.1.1 | Immunoglobulin |
| View | Download | 0.339 | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
| View | Download | 0.321 | b.40.6 | MOP-like |
| View | Download | 0.300 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.299 | b.1.1 | Immunoglobulin |
| View | Download | 0.295 | b.1.2 | Fibronectin type III |
| View | Download | 0.288 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.287 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.284 | b.101.1 | Ribonuclease domain of colicin E3 |
| View | Download | 0.283 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.278 | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
| View | Download | 0.273 | b.101.1 | Ribonuclease domain of colicin E3 |
| View | Download | 0.267 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.262 | b.101.1 | Ribonuclease domain of colicin E3 |
| View | Download | 0.258 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.257 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.251 | b.38.1 | Sm-like ribonucleoproteins |
| View | Download | 0.250 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.249 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.240 | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.236 | d.93.1 | SH2 domain |
| View | Download | 0.232 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.226 | b.38.1 | Sm-like ribonucleoproteins |
| View | Download | 0.221 | d.9.2 | Description not found. |
| View | Download | 0.217 | b.1.2 | Fibronectin type III |
| View | Download | 0.213 | b.55.1 | PH domain-like |
| View | Download | 0.207 | d.9.2 | Description not found. |
| View | Download | 0.204 | b.1.1 | Immunoglobulin |
| View | Download | 0.201 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
