| Protein: | DAL80 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 269 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAL80.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-67 | [1..269] | [1..269] |
|
|
3.0E-43 | [1..216] | [154..384] |
|
|
3.0E-41 | [9..216] | [216..439] |
|
|
5.0E-40 | [3..216] | [210..437] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MVLSDSLKLP SPTLSAAAGV DDCDGEDHPT CQNCFTVKTP LWRRDEHGTV LCNACGLFLK 60
61 LHGEPRPISL KTDTIKSRNR KKLNNNNVNT NANTH
|
| Detection Method: |  |
| Confidence: | 176.08661 |
| Match: | 4gatA_ |
| Description: | Erythroid transcription factor GATA-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.00967542385368 | bayes_pls_golite062009 |
| binding | 3.53535874483763 | bayes_pls_golite062009 |
| DNA binding | 3.36252792779457 | bayes_pls_golite062009 |
| nucleic acid binding | 3.05528938535257 | bayes_pls_golite062009 |
| transcription factor activity | 2.70303114587416 | bayes_pls_golite062009 |
| transcription activator activity | 1.62405765585032 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.5397618957429 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.50210964370113 | bayes_pls_golite062009 |
| transcription factor binding | 1.38523780690867 | bayes_pls_golite062009 |
| ligand-dependent nuclear receptor activity | 1.37025623768659 | bayes_pls_golite062009 |
| protein binding | 1.29473277650963 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.58115018700114 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.57492522309817 | bayes_pls_golite062009 |
| transcription repressor activity | 0.256420113528322 | bayes_pls_golite062009 |
| catalytic activity | 0.101795606736461 | bayes_pls_golite062009 |
|
Region A: Residues: [96-269] |
1 11 21 31 41 51
| | | | | |
1 SNDPNKIFKR KKRLLTTGGG SLPTNNPKVS ILEKFMVSGS IKPLLKPKET VPNTKECSTQ 60
61 RGKFSLDPCE PSGKNYLYQI NGSDIYTSNI ELTRLPNLST LLEPSPFSDS AVPEIELTWK 120
121 LHNEEEVIKL KTKISELELV TDLYKKHIFQ LNEKCKQLEV ELHSRASVQS HPQH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
