| Protein: | TRP3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 484 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRP3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..484] | [1..484] |
|
|
0.0 | [15..483] | [4..494] |
|
|
0.0 | [2..483] | [8..503] |
|
|
0.0 | [2..483] | [14..515] |
|
|
0.0 | [2..483] | [10..519] |
|
|
0.0 | [2..483] | [10..519] |
|
|
0.0 | [2..483] | [10..516] |
|
|
0.0 | [2..483] | [10..517] |
|
Region A: Residues: [1-252] |
1 11 21 31 41 51
| | | | | |
1 MSVHAATNPI NKHVVLIDNY DSFTWNVYEY LCQEGAKVSV YRNDAITVPE IAALNPDTLL 60
61 ISPGPGHPKT DSGISRDCIR YFTGKIPVFG ICMGQQCMFD VFGGEVAYAG EIVHGKTSPI 120
121 SHDNCGIFKN VPQGIAVTRY HSLAGTESSL PSCLKVTAST ENGIIMGVRH KKYTVEGVQF 180
181 HPESILTEEG HLMIRNILNV SGGTWEENKS SPSNSILDRI YARRKIDVNE QSKIPGFTFQ 240
241 DLQSNYDLGL AP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| anthranilate synthase activity | 9.07528926783927 | bayes_pls_golite062009 |
| oxo-acid-lyase activity | 7.16633518631507 | bayes_pls_golite062009 |
| 4-amino-4-deoxychorismate synthase activity | 4.48164623771604 | bayes_pls_golite062009 |
| indole-3-glycerol-phosphate synthase activity | 4.14261580175621 | bayes_pls_golite062009 |
| ligase activity | 1.70348758031146 | bayes_pls_golite062009 |
| catalytic activity | 1.30391542469987 | bayes_pls_golite062009 |
| nucleic acid binding | 0.86323855032533 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.628648036096965 | bayes_pls_golite062009 |
| binding | 0.588714599255874 | bayes_pls_golite062009 |
| imidazoleglycerol-phosphate synthase activity | 0.270391651600004 | bayes_pls_golite062009 |
| carbon-carbon lyase activity | 0.0769356405014503 | bayes_pls_golite062009 |
| protein binding | 0.0152024556625711 | bayes_pls_golite062009 |
|
Region A: Residues: [253-484] |
1 11 21 31 41 51
| | | | | |
1 PLQDFYTVLS SSHKRAVVLA EVKRASPSKG PICLKAVAAE QALKYAEAGA SAISVLTEPH 60
61 WFHGSLQDLV NVRKILDLKF PPKERPCVLR KEFIFSKYQI LEARLAGADT VLLIVKMLSQ 120
121 PLLKELYSYS KDLNMEPLVE VNSKEELQRA LEIGAKVVGV NNRDLHSFNV DLNTTSNLVE 180
181 SIPKDVLLIA LSGITTRDDA EKYKKEGVHG FLVGEALMKS TDVKKFIHEL CE
|
| Detection Method: | |
| Confidence: | 387.201249 |
| Match: | 1igs__ |
| Description: | Indole-3-glycerophosphate synthase, IPGS |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| indole-3-glycerol-phosphate synthase activity | 8.59736519932798 | bayes_pls_golite062009 |
| anthranilate synthase activity | 5.47492192345361 | bayes_pls_golite062009 |
| oxo-acid-lyase activity | 4.09809510052304 | bayes_pls_golite062009 |
| tryptophan synthase activity | 2.99898167480072 | bayes_pls_golite062009 |
| phosphoribosylanthranilate isomerase activity | 2.57188946638955 | bayes_pls_golite062009 |
| catalytic activity | 2.44231061702877 | bayes_pls_golite062009 |
| carbon-carbon lyase activity | 1.80077901589281 | bayes_pls_golite062009 |
| carboxy-lyase activity | 1.32677036501434 | bayes_pls_golite062009 |
| ribulose-phosphate 3-epimerase activity | 0.966175242934785 | bayes_pls_golite062009 |
| binding | 0.626392473915547 | bayes_pls_golite062009 |
| imidazoleglycerol-phosphate synthase activity | 0.567370625225674 | bayes_pls_golite062009 |
| lyase activity | 0.258652421339738 | bayes_pls_golite062009 |
| protein binding | 0.014429239696785 | bayes_pls_golite062009 |
