| Protein: | GFA1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 717 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GFA1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..717] | [1..717] |
|
|
0.0 | [1..717] | [1..697] |
|
|
0.0 | [1..717] | [1..681] |
|
|
0.0 | [1..717] | [1..683] |
|
Region A: Residues: [1-302] |
1 11 21 31 41 51
| | | | | |
1 MCGIFGYCNY LVERSRGEII DTLVDGLQRL EYRGYDSTGI AIDGDEADST FIYKQIGKVS 60
61 ALKEEITKQN PNRDVTFVSH CGIAHTRWAT HGRPEQVNCH PQRSDPEDQF VVVHNGIITN 120
121 FRELKTLLIN KGYKFESDTD TECIAKLYLH LYNTNLQNGH DLDFHELTKL VLLELEGSYG 180
181 LLCKSCHYPN EVIATRKGSP LLIGVKSEKK LKVDFVDVEF PEENAGQPEI PLKSNNKSFG 240
241 LGPKKAREFE AGSQNANLLP IAANEFNLRH SQSRAFLSED GSPTPVEFFV SSDAASVVKH 300
301 TK
|
| Detection Method: |  |
| Confidence: | 966.9897 |
| Match: | 1jxaA_ |
| Description: | "Isomerase domain" of glucosamine 6-phosphate synthase (GLMS); Glucosamine 6-phosphate synthase, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 1.34295853726897 | bayes_pls_golite062009 |
| catalytic activity | 1.19663085909195 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 1.16226272745141 | bayes_pls_golite062009 |
| nucleic acid binding | 0.798789250029517 | bayes_pls_golite062009 |
| endopeptidase activity | 0.759765292911898 | bayes_pls_golite062009 |
| binding | 0.541510243044181 | bayes_pls_golite062009 |
| transferase activity | 0.526806728662348 | bayes_pls_golite062009 |
|
Region A: Residues: [303-548] |
1 11 21 31 41 51
| | | | | |
1 KVLFLEDDDL AHIYDGELHI HRSRREVGAS MTRSIQTLEM ELAQIMKGPY DHFMQKEIYE 60
61 QPESTFNTMR GRIDYENNKV ILGGLKAWLP VVRRARRLIM IACGTSYHSC LATRAIFEEL 120
121 SDIPVSVELA SDFLDRKCPV FRDDVCVFVS QSGETADTML ALNYCLERGA LTVGIVNSVG 180
181 SSISRVTHCG VHINAGPEIG VASTKAYTSQ YIALVMFALS LSDDRVSKID RRIEIIQGLK 240
241 LIPGQI
|
|
Region B: Residues: [704-717] |
1 11 21 31 41 51
| | | | | |
1 VDFPRNLAKS VTVE
|
| Detection Method: | |
| Confidence: | 966.9897 |
| Match: | 1jxaA_ |
| Description: | "Isomerase domain" of glucosamine 6-phosphate synthase (GLMS); Glucosamine 6-phosphate synthase, N-terminal domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [549-703] |
1 11 21 31 41 51
| | | | | |
1 KQVLKLEPRI KKLCATELKD QKSLLLLGRG YQFAAALEGA LKIKEISYMH SEGVLAGELK 60
61 HGVLALVDEN LPIIAFGTRD SLFPKVVSSI EQVTARKGHP IIICNENDEV WAQKSKSIDL 120
121 QTLEVPQTVD CLQGLINIIP LQLMSYWLAV NKGID
|
| Detection Method: | |
| Confidence: | 966.9897 |
| Match: | 1jxaA_ |
| Description: | "Isomerase domain" of glucosamine 6-phosphate synthase (GLMS); Glucosamine 6-phosphate synthase, N-terminal domain |
| Matching Structure (courtesy of the PDB): |
|
