| Protein: | TUL1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 758 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TUL1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..758] | [1..758] |
|
|
2.0E-91 | [177..489] | [190..522] |
|
|
4.0E-73 | [313..758] | [223..676] |
|
|
1.0E-56 | [395..756] | [13..334] |
|
|
3.0E-56 | [395..755] | [14..336] |
|
|
1.0E-52 | [396..757] | [14..335] |
|
|
2.0E-51 | [363..756] | [498..833] |
|
Region A: Residues: [1-360] |
1 11 21 31 41 51
| | | | | |
1 MEIDGNTLVF IIVILFLFFS SPGGDGVSSQ YEFNQLQRLK QQFRTEHNTF VNMTYTDSFR 60
61 NITGLKLSYQ DMLNNPLQNA TYPLPGKDYD RWFPNQNYMV LPNDVIEAIN TEVWNTSNDD 120
121 ASNLFPPNIT STLLGKIDLV SNNKYEKIRM PVPRFYEPAT DFSEDIPPEG ETYWSEWPSY 180
181 GELHNVSFQH GEIAIQISHM SNLQDNNNYL RRNFINKKND RWKLLNLQID FSDKAEKEKH 240
241 SIYSKAVYDI QRGRILSISQ SSKFHSLFAL PHYMSFQNDY NEKIFNDVKE LVDEFWNFTD 300
301 YTDVMTMKDV QDAYNNANFK CEYLIFLQLE PWNQYTRDQI KLIDDELNWP LGRPANLSSL 360
361
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [361-597] |
1 11 21 31 41 51
| | | | | |
1 PPINVVSGLL YSPDCGVRLG LHNVKGTRYE LKIMSIRKHL LFGIALFAAQ IYLLLTQMHH 60
61 TNTPSMVNKI SFYCFSMINL VDGSLATLYF VAASVVPELY LPLVISAFSC FILASIFEIR 120
121 YLISIYASQV NEQNVGIINL LRGNTGTYDE NRPRPAFIPD EGSIGGSLYG RFFFMLIIFT 180
181 FLILSSTSWP RQLRMVFEYI LIFILNSYWI PQIFRNAVKG IPSRRERARS SIGGNRS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [598-693] |
1 11 21 31 41 51
| | | | | |
1 QNKMPLLWSF VIGTTIIRSL PVVYVFTYSS NVFRHHKDVH FVVFLSLWLL FQISILYSQD 60
61 VLGSRWFLPK HTIPDGYSYF KPLSNEYISE HGGGTA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [694-758] |
1 11 21 31 41 51
| | | | | |
1 EHTVDCAICM SDVPIYIEEI PETHKVDQHS YMVTPCNHVF HTSCLENWMN YKLQCPVCRS 60
61 PLPPL
|
| Detection Method: | |
| Confidence: | 7.69897 |
| Match: | 1chc__ |
| Description: | Immediate early protein, IEEHV |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [678-758] |
1 11 21 31 41 51
| | | | | |
1 KPLSNEYISE HGGGTAEHTV DCAICMSDVP IYIEEIPETH KVDQHSYMVT PCNHVFHTSC 60
61 LENWMNYKLQ CPVCRSPLPP L
|
| Detection Method: | |
| Confidence: | 13.69897 |
| Match: | 1iymA |
| Description: | EL5 RING-H2 domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 5.32809533104435 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 5.17943669371679 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 4.2482314105959 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 3.07217714843839 | bayes_pls_golite062009 |
| binding | 1.76493579130903 | bayes_pls_golite062009 |
| protein binding | 1.73461977726143 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 0.786612602432575 | bayes_pls_golite062009 |
| ligase activity | 0.63517530468004 | bayes_pls_golite062009 |
| peptidase activity | 0.592030999071526 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 0.549461161056205 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 0.349795095432233 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 0.159023519781458 | bayes_pls_golite062009 |
| hydrolase activity | 0.156835837705934 | bayes_pls_golite062009 |
| catalytic activity | 0.14112008370434 | bayes_pls_golite062009 |
| nucleic acid binding | 0.125491277540945 | bayes_pls_golite062009 |
