| Protein: | CCE1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 353 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCE1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..353] | [1..353] |
|
|
4.0E-80 | [9..319] | [10..321] |
|
|
1.0E-65 | [69..314] | [42..250] |
|
Region A: Residues: [1-353] |
1 11 21 31 41 51
| | | | | |
1 MSTAQKAKIL QLIDSCCQNA KSTQLKSLSF VIGAVNGTTK EAKRTYIQEQ CEFLEKLRQQ 60
61 KIREGRINIL SMDAGVSNFA FSKMQLLNND PLPKVLDWQK INLEEKFFQN LKKLSLNPAE 120
121 TSELVFNLTE YLFESMPIPD MFTIERQRTR TMSSRHILDP ILKVNILEQI LFSNLENKMK 180
181 YTNKIPNTSK LRYMVCSSDP HRMTSYWCIP REETPTSSKK LKSNKHSKDS RIKLVKKILS 240
241 TSILEGNSTS STKLVEFIGV WNNRIRNALT KKKSFKLCDI LEIQDNSGVR KDDDLADSFL 300
301 HCLSWMEWLK NYESITELLN SKTLVKTQFG QVFEFCENKV QKLKFLQNTY NND
|
| Detection Method: |  |
| Confidence: | 123.38764 |
| Match: | 1kcfA_ |
| Description: | Mitochondrial resolvase ydc2 N-terminal domain; Mitochondrial resolvase ydc2 catalytic domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nuclease activity | 2.42408996498686 | bayes_pls_golite062009 |
| exonuclease activity | 2.2254764376369 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 1.75713164321634 | bayes_pls_golite062009 |
| hydrolase activity | 1.66727833471421 | bayes_pls_golite062009 |
| ribonuclease activity | 1.41033617404868 | bayes_pls_golite062009 |
| catalytic activity | 1.25233849524628 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 1.19309748194103 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 1.1219517187744 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 0.72566997912926 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.717600245625866 | bayes_pls_golite062009 |
| endonuclease activity | 0.635517699603511 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 0.568273228950698 | bayes_pls_golite062009 |
| binding | 0.332806037334937 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity | 0.278838342302102 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity, producing 5'-phosphomonoesters | 0.261428436029202 | bayes_pls_golite062009 |
| exoribonuclease activity | 0.14466215642144 | bayes_pls_golite062009 |
| nucleic acid binding | 0.129994528216387 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 0.0662718964590603 | bayes_pls_golite062009 |
