| Protein: | FIP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 327 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FIP1.
| Description | E-value | Query Range |
Subject Range |
|
|
212.0 | [0..24] | [247..81] |
|
|
208.0 | [0..65] | [249..11] |
|
|
205.0 | [0..61] | [258..2] |
|
|
185.0 | [0..11] | [221..25] |
|
|
178.0 | [0..11] | [221..24] |
|
|
173.0 | [0..11] | [316..25] |
|
|
173.0 | [0..11] | [221..24] |
|
Region A: Residues: [1-258] |
1 11 21 31 41 51
| | | | | |
1 MSSSEDEDDK FLYGSDSELA LPSSKRSRDD EADAGASSNP DIVKRQKFDS PVEETPATAR 60
61 DDRSDEDIYS DSSDDDSDSD LEVIISLGPD PTRLDAKLLD SYSTAATSSS KDVISVATDV 120
121 SNTITKTSDE RLITEGEANQ GVTATTVKAT ESDGNVPKAM TGSIDLDKEG IFDSVGITTI 180
181 DPEVLKEKPW RQPGANLSDY FNYGFNEFTW MEYLHRQEKL QQDYNPRRIL MGLLSLQQQG 240
241 KLNSANDTDS NLGNIIDN
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [259-327] |
1 11 21 31 41 51
| | | | | |
1 NNNVNNANMS NLNSNMGNSM SGTPNPPAPP MHPSFPPLPM FGSFPPFPMP GMMPPMNQQP 60
61 NQNQNQNSK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.314 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.284 | c.5.1 | MurCD N-terminal domain |
| View | Download | 0.284 | c.5.1 | MurCD N-terminal domain |
| View | Download | 0.264 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.252 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.249 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.212 | a.57.1 | Protein HNS-dependent expression A; HdeA |
