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Protein Overview: SPAC22G7.10

General Information:
Name(s) found: SPAC22G7.10 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • mRNA cleavage and polyadenylation specificity factor complex subunit, Fip1 homolog [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 344 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    mRNA cleavage and polyadenylation specificity factor complex [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: mRNA polyadenylation [ISSLink to PubMed article]
    mRNA cleavage [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNADQHMDV DEDEYLYGET IEERNDGVTV SNAKSPEQAS EESDDSDIEF IIETKPGERA  60
   61 EPLGGSIATL GSTRPSAKPQ VEKTAVEVKT TEPQDLSTAE TAPKVDIDAV PTIDGKNIFE 120
  121 IDLESFDDKP WRKPGADISD YFNYGFDEFT WAAYCAKQTT LRDDFSPQKF MASLAQIPGP 180
  181 LPSGNVPSPA EFQAMMASGF PPFMPIPPPI GGPQEDMGYS RNFPVHASSN YNTTHTSGGG 240
  241 VHSGAATPNA YVNNNPSSSR RESESPANSP NITSSAGMTH AQPTHNPTSS YGNGASTNYN 300
  301 ASRPPSNHPH SSNYPSSSRR KPSPDRYSNY SSRGSGGRYR RNRY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] MSA 1.046993 View MSA. No confident structure predictions are available.
    2 View Details [115..176] Pfam 41.200659 No description for PF05182.4 was found. No confident structure predictions are available.
    3 View Details [177..344] MSA 1.027994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle