YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: fipp-1

General Information:
Name(s) found: fipp-1 / CE09873 [WormBase]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • WBGene00017988 locus:fipp-1 status:Partially_confirmed UniProt:O16293 protein_id:CCD68489.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 513 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDFDDEPAV VHLSDDEEHA VAPVEDSENP DVIQLDDDVI PEEDVPDDEE TAENLENLEN  60
   61 VLDDSEIIAE NSGEADQEVE EEDNPFADDD DSDEDGGGVQ VTIRKMEPTE KPAARQGKLD 120
  121 LDTTATINDK PIYDLDLAQM EDRPWRKPGA DITDYFNYGF TEETWNLYCE RQKKLRIEFA 180
  181 GNQKAANEAL FSSIKIANPL ANPVMNTTSS VVKVLTDNGG RFKQHVHQSA APTPLMNDQV 240
  241 IRTVISGNNQ SAPSLMDFTR PPPGMSMPPP MGTAPPTSVA DAPPGVDMSS DLPPGVESAP 300
  301 GASVAPLLPG GLDLNLGLPP LGFNPNMPPP GMPPMGMMST SLPPPGFAMP PPQFQQHSRA 360
  361 GFGPGPVGAA SAPRSLMGSG AFSTVSDDDE ERRSSRRKRS RSRSPHRDRD RDRRDRETRR 420
  421 RGERESDRTS SRRHRSRSAS GDRRRKRDDR EREKRRERRG DDEDRKKRSR RGDEEEESSS 480
  481 GRKERKEKSS RSRHEDEESS TGVVVKEEIP DDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..147] FFAS03 0.972 No description for 2bsqA was found.
    2 View Details [148..341] MSA 7.179997 View MSA. No confident structure predictions are available.
    3 View Details [342..513] FFAS03 1.01 TUBULIN-PODOPHYLLOTOXIN: STATHMIN-LIKE DOMAIN COMPLEX

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.7494587357029 bayes_pls_golite062009
  • hydrolase activity
    		•  0.115443371354425 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle