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Protein Overview: Fip1-PA

General Information:
Name(s) found: Fip1-PA / FBpp0078568 [FlyBase]
Description(s) found:
Found 19 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\Fip1 (CG1078, FBgn0037255). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:310763..313185. It has the cytological map location 82B3-82B4. There is experimental evidence that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: histone mRNA 3'-end processing. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 701 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: histone mRNA 3'-end processing [IMP]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADDTNEDSW LYGTSNPDST TGELGNGGDS LTAEHESAAA EAQALAELVA GEKPGASAGT  60
   61 NSTEDSPRCP KEEVPEYSEF DDPAQEMEED EDALPNTDSR SRRERDRERD RGRCADRADA 120
  121 RSSPDPEDDE MSDGPAARRE RNGSGSDDDE DDDSDDDINV VIGDIKQAPS TYNIKQRPNL 180
  181 LAGGTGAAGD KAKPAGQAGK FSIEDFEGAG TINGVAVHEF SIDSLEEKPW RKPGADITDY 240
  241 FNYGFNEETW RAYCERQKRF RVAESGVGLA SLTQNVNQNA PIGILTDGGM GMGPPGMHSI 300
  301 QSMVGMGGES GMQMPPPGMP PPMMQHQSRS GMGLMQRPPR PISTTGGDRG GDRERAVKEN 360
  361 AIQVMTAECR EYSRGGLGPM APNFPLPGAS EEPFFHEPEP FDYGYEPTQE SQWNNDNAGW 420
  421 VPSGIKELTP GHAHMQQPPP GMPPPGMSVP PPQMGGPPPN LRGIMPPNMR MPPNMNMGPP 480
  481 PGMMMGGNAP PQMRMGMAPP QRLAMGDRGA YDDDRERRRR EKEKLLKKDQ LRKDFLDMLR 540
  541 ERHDIERHTR WYDIKKKFEA DPRYRALDSS YREEYFEDYL HLLKEEKRKE RDLKERERHR 600
  601 DKERSRDKDK DKDKEKDKDK DKDKEKDKEK DKDKDKEKEK DKESSRRERS RSREKSSRRK 660
  661 SKSREKDRSE RSSKSSSSNT GGSSSRSEKK KSHRKDKEED D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] deduced N/A No confident structure predictions are available.
    2 View Details [163..277] Pfam 36.481486 No description for PF05182.4 was found. No confident structure predictions are available.
    3 View Details [278..441] PSI-BLAST 5.0 No description for 1y0fB was found.
    4 View Details [442..701] PSI-BLAST 15.0 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle