| Protein: | YAK1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 807 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YAK1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..807] | [1..807] |
|
|
0.0 | [2..759] | [300..1053] |
|
|
0.0 | [11..652] | [156..813] |
|
|
0.0 | [56..776] | [11..722] |
|
|
0.0 | [180..768] | [2..572] |
|
|
0.0 | [180..768] | [2..574] |
|
|
0.0 | [1..772] | [442..1205] |
|
Region A: Residues: [1-339] |
1 11 21 31 41 51
| | | | | |
1 MNSSNNNDSS SSNSNMNNSL SPTLVTHSDA SMGSGRASPD NSHMGRGIWN PSYVNQGSQR 60
61 SPQQQHQNHH QQQQQQQQQQ QQNSQFCFVN PWNEEKVTNS QQNLVYPPQY DDLNSNESLD 120
121 AYRRRKSSLV VPPARAPAPN PFQYDSYPAY TSSNTSLAGN SSGQYPSGYQ QQQQQVYQQG 180
181 AIHPSQFGSR FVPSLYDRQD FQRRQSLAAT NYSSNFSSLN SNTNQGTNSI PVMSPYRRLS 240
241 AYPPSTSPPL QPPFKQLRRD EVQGQKLSIP QMQLCNSKND LQPVLNATPK FRRASLNSKT 300
301 ISPLVSVTKS LITTYSLCSP EFTYQTSKNP KRVLTKPSE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [340-451] |
1 11 21 31 41 51
| | | | | |
1 GKCNNGFDNI NSDYILYVND VLGVEQNRKY LVLDILGQGT FGQVVKCQNL LTKEILAVKV 60
61 VKSRTEYLTQ SITEAKILEL LNQKIDPTNK HHFLRMYDSF VHKNHLCLVF EL
|
| Detection Method: | |
| Confidence: | 434.0 |
| Match: | 1aq1__ |
| Description: | Cyclin-dependent PK, CDK2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [452-531] |
1 11 21 31 41 51
| | | | | |
1 LSNNLYELLK QNKFHGLSIQ LIRTFTTQIL DSLCVLKESK LIHCDLKPEN ILLCAPDKPE 60
61 LKIIDFGSSC EEARTVYTYI
|
|
Region B: Residues: [655-661] |
1 11 21 31 41 51
| | | | | |
1 RYPKSIQ
|
| Detection Method: | |
| Confidence: | 434.0 |
| Match: | 1aq1__ |
| Description: | Cyclin-dependent PK, CDK2 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [532-581] |
1 11 21 31 41 51
| | | | | |
1 QSRFYRAPEI ILGIPYSTSI DMWSLGCIVA ELFLGIPIFP GASEYNQLTR
|
| Detection Method: | |
| Confidence: | 434.0 |
| Match: | 1aq1__ |
| Description: | Cyclin-dependent PK, CDK2 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [582-654] |
1 11 21 31 41 51
| | | | | |
1 IIDTLGYPPS WMIDMGKNSG KFMKKLAPEE SSSSTQKHRM KTIEEFCREY NIVEKPSKQY 60
61 FKWRKLPDII RNY
|
| Detection Method: | |
| Confidence: | 434.0 |
| Match: | 1aq1__ |
| Description: | Cyclin-dependent PK, CDK2 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [662-807] |
1 11 21 31 41 51
| | | | | |
1 NSQELIDQEM QNRECLIHFL GGVLNLNPLE RWTPQQAMLH PFITKQEFTG EWFPPGSSLP 60
61 GPSEKHDDAK GQQSEYGSAN DSSNNAGHNY VYNPSSATGG ADSVDIGAIS KRKENTSGDI 120
121 SNNFAVTHSV QEGPTSAFNK LHIVEE
|
| Detection Method: | |
| Confidence: | 10.52 |
| Match: | 1i09A |
| Description: | Glycogen synthase kinase-3 beta (Gsk3b) |
Matching Structure (courtesy of the PDB): |
|
