| Protein: | UTP10 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1769 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UTP10.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [831..1767] | [1..957] |
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0.0 | [1..1769] | [1..1769] |
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0.0 | [713..1767] | [1067..2143] |
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0.0 | [2..1768] | [3..1648] |
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0.0 | [748..1768] | [665..1690] |
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0.0 | [824..1764] | [606..1643] |
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0.0 | [1436..1767] | [9..348] |
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Region A: Residues: [1-186] |
1 11 21 31 41 51
| | | | | |
1 MSSLSDQLAQ VASNNATVAL DRKRRQKLHS ASLIYNSKTA ATQDYDFIFE NASKALEELS 60
61 QIEPKFAIFS RTLFSESSIS LDRNVQTKEE IKDLDNAINA YLLLASSKWY LAPTLHATEW 120
121 LVRRFQIHVK NTEMLLLSTL NYYQTPVFKR ILSIIKLPPL FNCLSNFVRS EKPPTALTMI 180
181 KLFNDM
|
| Detection Method: |  |
| Confidence: | 2.7 |
| Match: | 1b3uA |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [187-253] |
1 11 21 31 41 51
| | | | | |
1 DFLKLYTSYL DQCIKHNATY TNQLLFTTCC FINVVAFNSN NDEKLNQLVP ILLEISAKLL 60
61 ASKSKDC
|
| Detection Method: | |
| Confidence: | 2.7 |
| Match: | 1b3uA |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [254-401] |
1 11 21 31 41 51
| | | | | |
1 QIAAHTILVV FATALPLKKT IILAAMETIL SNLDAKEAKH SALLTICKLF QTLKGQGNVD 60
61 QLPSKIFKLF DSKFDTVSIL TFLDKEDKPV CDKFITSYTR SIARYDRSKL NIILSLLKKI 120
121 RLERYEVRLI ITDLIYLSEI LEDKSQLV
|
| Detection Method: | |
| Confidence: | 2.7 |
| Match: | 1b3uA |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [402-606] |
1 11 21 31 41 51
| | | | | |
1 ELFEYFISIN EDLVLKCLKS LGLTGELFEI RLTTSLFTNA DVNTDIVKQL SDPVETTKKD 60
61 TASFQTFLDK HSELINTTNV SMLTETGERY KKVLSLFTEA IGKGYKASSF LTSFFTTLES 120
121 RITFLLRVTI SPAAPTALKL ISLNNIAKYI NSIEKEVNIF TLVPCLICAL RDASIKVRTG 180
181 VKKILSLIAK RPSTKHYFLS DKLYG
|
| Detection Method: | |
| Confidence: | 2.7 |
| Match: | 1b3uA |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [607-663] |
1 11 21 31 41 51
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1 ENVTIPMLNP KDSEAWLSGF LNEYVTENYD ISRILTPKRN EKVFLMFWAN QALLIPS
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.398 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.293 | d.93.1 | SH2 domain |
| View | Download | 0.353 | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.283 | d.76.1 | GYF domain |
| View | Download | 0.275 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.273 | d.47.1 | Ribosomal protein L11, N-terminal domain |
| View | Download | 0.258 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.237 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.224 | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.224 | b.122.1 | PUA domain-like |
| View | Download | 0.202 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| Term | Confidence | Notes |
| RNA binding | 3.36069436734718 | bayes_pls_golite062009 |
| binding | 2.96084803796407 | bayes_pls_golite062009 |
| nucleic acid binding | 2.69616509670156 | bayes_pls_golite062009 |
| protein binding | 2.66176697577398 | bayes_pls_golite062009 |
| transcription regulator activity | 2.19067997822967 | bayes_pls_golite062009 |
| DNA binding | 1.96172460362671 | bayes_pls_golite062009 |
| structural molecule activity | 1.49650156618775 | bayes_pls_golite062009 |
| transcription activator activity | 1.47146260606784 | bayes_pls_golite062009 |
| mRNA binding | 1.35186555044783 | bayes_pls_golite062009 |
| transcription factor activity | 1.21493607378314 | bayes_pls_golite062009 |
| transcription factor binding | 8.79739237675814E-4 | bayes_pls_golite062009 |
|
Region A: Residues: [664-818] |
1 11 21 31 41 51
| | | | | |
1 PYAKTVLLDN LNKSPTYASS YSSLFEEFIS HYLENRSSWE KSCIANKTNF EHFERSLVNL 60
61 VSPKEKQSFM IDFVLSALNS DYEQLANIAA ERLISIFASL NNAQKLKIVQ NIVDSSSNVE 120
121 SSYDTVGVLQ SLPLDSDIFV SILNQNSISN EMDQT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.677 | 0.132 | small nucleolar ribonucleoprotein complex | a.118.1 | ARM repeat |
| View | Download | 0.754 | 0.079 | small nucleolar ribonucleoprotein complex | a.118.8 | TPR-like |
| View | Download | 0.615 | 0.041 | small nucleolar ribonucleoprotein complex | a.118.9 | ENTH/VHS domain |
| View | Download | 0.602 | 0.009 | small nucleolar ribonucleoprotein complex | a.118.7 | 14-3-3 protein |
| View | Download | 0.783 | 0.006 | small nucleolar ribonucleoprotein complex | a.118.15 | Aconitase B, N-terminal domain |
| View | Download | 0.584 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.567 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.558 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.518 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.504 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.503 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.493 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.426 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.391 | N/A | N/A | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.367 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.358 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.332 | N/A | N/A | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.318 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.315 | N/A | N/A | a.72.1 | Functional domain of the splicing factor Prp18 |
| View | Download | 0.305 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.299 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.296 | N/A | N/A | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.289 | N/A | N/A | d.224.1 | SufE-like |
| View | Download | 0.284 | N/A | N/A | a.146.1 | Telomeric repeat binding factor (TRF) dimerisation domain |
| View | Download | 0.280 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.276 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.271 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.270 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.267 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.266 | N/A | N/A | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.265 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.254 | N/A | N/A | d.211.1 | Ankyrin repeat |
| View | Download | 0.248 | N/A | N/A | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.246 | N/A | N/A | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.233 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.228 | N/A | N/A | c.23.16 | Class I glutamine amidotransferase-like |
| View | Download | 0.225 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.223 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.220 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.218 | N/A | N/A | f.18.1 | F1F0 ATP synthase subunit A |
| View | Download | 0.214 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.214 | N/A | N/A | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.213 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.213 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.202 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.202 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
|
Region A: Residues: [819-1769] |
1 11 21 31 41 51
| | | | | |
1 DFSKRRRRRS STSKNAFLKE EVSQLAELHL RKLTIILEAL DKVRNVGSEK LLFTLLSLLS 60
61 DLETLDQDGG LPVLYAQETL ISCTLNTITY LKEHGCTELT NVRADILVSA IRNSASPQVQ 120
121 NKLLLVIGSL ATLSSEVILH SVMPIFTFMG AHSIRQDDEF TTKVVERTIL TVVPALIKNS 180
181 KGNEKEEMEF LLLSFTTALQ HVPRHRRVKL FSTLIKTLDP VKALGSFLFL IAQQYSSALV 240
241 NFKIGEARIL IEFIKALLVD LHVNEELSGL NDLLDIIKLL TSSKSSSEKK KSLESRVLFS 300
301 NGVLNFSESE FLTFMNNTFE FINKITEETD QDYYDVRRNL RLKVYSVLLD ETSDKKLIRN 360
361 IREEFGTLLE GVLFFINSVE LTFSCITSQE NEEASDSETS LSDHTTEIKE ILFKVLGNVL 420
421 QILPVDEFVN AVLPLLSTST NEDIRYHLTL VIGSKFELEG SEAIPIVNNV MKVLLDRMPL 480
481 ESKSVVISQV ILNTMTALVS KYGKKLEGSI LTQALTLATE KVSSDMTEVK ISSLALITNC 540
541 VQVLGVKSIA FYPKIVPPSI KLFDASLADS SNPLKEQLQV AILLLFAGLI KRIPSFLMSN 600
601 ILDVLHVIYF SREVDSSIRL SVISLIIENI DLKEVLKVLF RIWSTEIATS NDTVAVSLFL 660
661 STLESTVENI DKKSATSQSP IFFKLLLSLF EFRSISSFDN NTISRIEASV HEISNSYVLK 720
721 MNDKVFRPLF VILVRWAFDG EGVTNAGITE TERLLAFFKF FNKLQENLRG IITSYFTYLL 780
781 EPVDMLLKRF ISKDMENVNL RRLVINSLTS SLKFDRDEYW KSTSRFELIS VSLVNQLSNI 840
841 ENSIGKYLVK AIGALASNNS GVDEHNQILN KLIVEHMKAS CSSNEKLWAI RAMKLIYSKI 900
901 GESWLVLLPQ LVPVIAELLE DDDEEIEREV RTGLVKVVEN VLGEPFDRYL D
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
