| Protein: | DLS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 167 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DLS1.
| Description | E-value | Query Range |
Subject Range |
|
|
8.0E-44 | [13..149] | [72..200] |
|
|
5.0E-41 | [19..143] | [42..154] |
|
|
2.0E-40 | [19..143] | [42..154] |
|
|
2.0E-40 | [19..143] | [42..154] |
|
Region A: Residues: [1-110] |
1 11 21 31 41 51
| | | | | |
1 MNNETSGKET ASAPLCSPKL PVEKVQRIAK NDPEYMDTSD DAFVATAFAT EFFVQVLTHE 60
61 SLHRQQQQQQ QQVPPLPDEL TLSYDDISAA IVHSSDGHLQ FLNDVIPTTK
|
| Detection Method: |  |
| Confidence: | 20.0 |
| Match: | 1jfiA_ |
| Description: | Negative cofactor 2, NC2, alpha chain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA binding | 4.49118409263799 | bayes_pls_golite062009 |
| nucleic acid binding | 4.35201412176948 | bayes_pls_golite062009 |
| transcription regulator activity | 4.08606081850613 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 4.04353148658823 | bayes_pls_golite062009 |
| binding | 3.27510691458843 | bayes_pls_golite062009 |
| transcription factor activity | 2.51581622888695 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.38228606466152 | bayes_pls_golite062009 |
| transcription repressor activity | 2.3574713307436 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.30859203490073 | bayes_pls_golite062009 |
| transcription activator activity | 1.25487495162413 | bayes_pls_golite062009 |
| transcription factor binding | 1.15204005455906 | bayes_pls_golite062009 |
| transcription coactivator activity | 1.1297723528047 | bayes_pls_golite062009 |
| protein binding | 1.07873333188144 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.01502031330902 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0852726470007639 | bayes_pls_golite062009 |
|
Region A: Residues: [111-167] |
1 11 21 31 41 51
| | | | | |
1 NLRLLVEENR VRYTTSVMPP NEVYSAYVVN DTAPKPNIVE IDLDNDEDDD EDVTDQE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.822 | d.9.2 | Description not found. |
