| Protein: | NOP9 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 666 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NOP9.
| Description | E-value | Query Range |
Subject Range |
|
|
376.0 | [0..3] | [633..14] |
|
|
364.0 | [0..1] | [666..1] |
|
|
359.0 | [0..14] | [663..73] |
|
|
354.0 | [0..3] | [656..4] |
|
|
351.0 | [0..7] | [646..5] |
|
|
343.0 | [0..5] | [637..3] |
|
|
324.0 | [0..6] | [660..5] |
|
|
320.0 | [0..186] | [585..711] |
|
|
320.0 | [0..186] | [585..721] |
|
Region A: Residues: [1-172] |
1 11 21 31 41 51
| | | | | |
1 MGKTKTRGRR HQDKQRKDEF EPSSNSAKEH IQQEESTYND EAEIKETQPQ MFFGVLDREE 60
61 LEYFKQAEST LQLDAFEAPE EKFQFVTSII EEAKGKELKL VTSQITSKLM ERVILECDET 120
121 QLKDIFQSFN GVFFGLSCHK YASHVLETLF VRSAALVERE LLTPSFDNNE KE
|
| Detection Method: |  |
| Confidence: | 2.55 |
| Match: | 1ib2A |
| Description: | Pumilio 1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [173-576] |
1 11 21 31 41 51
| | | | | |
1 GPYVTMENMF LFMLNELKPH LKTMMNHQYA SHVLRLLILI LSSKTLPNST KANSTLRSKK 60
61 SKIARKMIDI KDNDDFNKVY QTPESFKSEL RDIITTLYKG FTNGAESRSD ISQSTITKFR 120
121 EYSVDKVASP VIQLIIQVEG IFDRDRSFWR LVFNTADEKD PKEESFLEYL LSDPVGSHFL 180
181 ENVIGSARLK YVERLYRLYM KDRIVKLAKR DTTGAFVVRA LLEHLKEKDV KQILDAVVPE 240
241 LSMLLNSNMD FGTAIINASN KQGGYLRDDV IAQLIQKYYP EKSDAKNILE SCLLLSASTL 300
301 GNTRDDWPTA EERRRSVFLE QLIDYDDKFL NITIDSMLAL PEERLIQMCY HGVFSHVVEH 360
361 VLQTTRVDII KRKMLLNILS KESVNLACNV YGSHIMDKLW EFTA
|
| Detection Method: | |
| Confidence: | 73.0 |
| Match: | 1ib2A |
| Description: | Pumilio 1 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [577-666] |
1 11 21 31 41 51
| | | | | |
1 KLTLYKERIA RALVLETEKV KNSIYGRQVW KNWKLELYVR KMWDWKKLIK EQEFEIFPNS 60
61 KPLQPKPEKH SRERNNSKEG SAFKKQKHYR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
