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Protein Overview: CG11123-PA

General Information:
Name(s) found: CG11123-PA / FBpp0088044 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG11123 (CG11123, FBgn0033169). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:3328198..3330390. It has the cytological map location 43C1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: RNA binding. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 665 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: RNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAEGDSRRK RPKKKGNRFM RNAKGFAKQG IFGRGTHIDD EQFNYFINIL DAMKVGFEDV  60
   61 EERVIMANNV FEQTHDQEIH LASNQIVSKA LESLVGFVDD VQLERFFSKF GDNLRPMCSD 120
  121 RFASHVLQKM LEIAFLRGVG KSAAQDTSDA ASANKKAKPD AAQEEEEYNL QADFTDDHRE 180
  181 KCRQFVLRIS KFMLNNLEDF VWDACASHIM RTAILCLVGM HVPKIAFEKG GTEIAKHRKM 240
  241 YSVPDEWQEV MKEFPQRLEM WPQFGDFPYQ DHSSSLLGVI CLALSVVDKS MLKHFAKKIL 300
  301 TIGLLKSSDE DEEKMELDTK IEIKDEDDDN DEKEDKKAKE ADADTENKQE EPKLPKVFHH 360
  361 QSSVILLETI MSVAGAKLMI QLYAMLFCNR IGYLARQPGT NFSVQRLLQH IKEVPDFESV 420
  421 FTELQPHVEE LLKMGYTGVV SALSAACLRL ATKQSQMIAA LQSALHVSGD KEKSKLFLTC 480
  481 LIKLKPFEVV TGDESAFVHL HGSLITQHLL QFNKPIFLVN CILDLPATQL AQVFNTPNGS 540
  541 HIVDAFMQSK FIGEKSRERL IRQLDGFYVD LAITRHGSRV FEQCFKAAQD AQKLRMAKEL 600
  601 FSKANMLKGS PHGRIIYTKY RLDTYKLSPT QWQESLSKHL DAEQTKETKR KTAKTAVEAF 660
  661 KDILS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..302] FFAS03 3.2 Pumilio 1
    2 View Details [303..665] PSI-BLAST 77.30103 Pumilio 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.267627928716605 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.373576425899935 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle