| Protein: | HOS4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1083 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HOS4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1083] | [1..1083] |
|
|
0.0 | [87..928] | [2..811] |
|
|
0.0 | [93..928] | [18..813] |
|
|
0.0 | [93..928] | [18..821] |
|
Region A: Residues: [1-202] |
1 11 21 31 41 51
| | | | | |
1 MNETTTKQPL KKRSLSSYLS NVSTRREELE KISKQETSEE EDTAGKHEQR ETLSEEVSDK 60
61 FPENVASFRS QTTSVHQATQ NNLNAKESED LAHKNDASSH EGEVNGDSRP DDVPETNEKI 120
121 SQAIRAKISS SSSSPNVRNV DIQNHQPFSR DQLRAMLKEP KRKTVDDFIE EEGLGAVEEE 180
181 DLSDEVLEKN TTEPENVEKD IE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [203-301] |
1 11 21 31 41 51
| | | | | |
1 YSDSDKDTDD VGSDDPTAPN SPIKLGRRKL VRGDQLDATT SSMFNNESDS ELSDIDDSKN 60
61 IALSSSLFRG GSSPVKETNN NLSNMNSSPA QNPKRGSVS
|
| Detection Method: | |
| Confidence: | 73.67837 |
| Match: | 1ihbA_ |
| Description: | p18ink4C(ink6) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [302-388] |
1 11 21 31 41 51
| | | | | |
1 RSNDSNKSSH IAVSKRPKQK KGIYRDSGGR TRLQIACDKG KYDVVKKMIE EGGYDINDQD 60
61 NAGNTALHEA ALQGHIEIVE LLIENGA
|
| Detection Method: | |
| Confidence: | 73.67837 |
| Match: | 1ihbA_ |
| Description: | p18ink4C(ink6) |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.60916417202222 | bayes_pls_golite062009 |
| protein binding | 1.64872738860757 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.39841714205637 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.89889442280136 | bayes_pls_golite062009 |
| transcription factor binding | 0.84590123339816 | bayes_pls_golite062009 |
| structural molecule activity | 0.808967137205604 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase regulator activity | 0.68541709976608 | bayes_pls_golite062009 |
| transcription regulator activity | 0.589753112911856 | bayes_pls_golite062009 |
| protein kinase regulator activity | 0.576422771673579 | bayes_pls_golite062009 |
| histone methyltransferase activity | 0.457348070377128 | bayes_pls_golite062009 |
| kinase regulator activity | 0.4228431685549 | bayes_pls_golite062009 |
| protein kinase activity | 0.348635473808088 | bayes_pls_golite062009 |
| nucleic acid binding | 0.280340492381105 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.144979134227429 | bayes_pls_golite062009 |
| DNA binding | 0.139886855398905 | bayes_pls_golite062009 |
| transcription repressor activity | 0.108244697820437 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.0107560517063403 | bayes_pls_golite062009 |
|
Region A: Residues: [389-481] |
1 11 21 31 41 51
| | | | | |
1 DVNIKSIEMF GDTPLIDASA NGHLDVVKYL LKNGADPTIR NAKGLTAFES VDDESEFDDE 60
61 EDQKILREIK KRLSIAAKKW TNRAGIHNDK SKN
|
| Detection Method: | |
| Confidence: | 111.9897 |
| Match: | 1awcB_ |
| Description: | GA bindinig protein (GABP) beta 1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [482-557] |
1 11 21 31 41 51
| | | | | |
1 GNNAHTIDQP PFDNTTKAKN EKAADSPSMA SNIDEKAPEE EFYWTDVTSR AGKEKLFKAS 60
61 KEGHLPYVGT YVENGG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [558-625] |
1 11 21 31 41 51
| | | | | |
1 KIDLRSFFES VKCGHEDITS IFLAFGFPVN QTSRDNKTSA LMVAVGRGHL GTVKLLLEAG 60
61 ADPTKRDK
|
| Detection Method: | |
| Confidence: | 134.29073 |
| Match: | 1myo__ |
| Description: | Myotrophin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [626-678] |
1 11 21 31 41 51
| | | | | |
1 KGRTALYYAK NSIMGITNSE EIQLIENAIN NYLKKHSEDN NDDDDDDDNN NET
|
| Detection Method: | |
| Confidence: | 134.29073 |
| Match: | 1myo__ |
| Description: | Myotrophin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [679-939] |
1 11 21 31 41 51
| | | | | |
1 YKHEKKREKT QSPILASRRS ATPRIEDEED DTRMLNLADD DFNNDRDVKE STTSDSRKRL 60
61 DDNENVGTQY SLDWKKRKTN ALQDEEKLKS ISPLSMEPHS PKKAKSVEIS KIHEETAAER 120
121 EARLKEEEEY RKKRLEKKRK KEQELLQKLA EDEKKRIEEQ EKQKVLEMER LEKATLEKAR 180
181 KMEREKEMEE ISYRRAVRDL YPLGLKIINF NDKLDYKRFL PLYYFVDEKN DKFVLDLQVM 240
241 ILLKDIDLLS KDNQPTSEKI P
|
| Detection Method: | |
| Confidence: | 11.83 |
| Match: | 1ldvA |
| Description: | No description for 1ldvA was found. |
|
Region A: Residues: [940-1083] |
1 11 21 31 41 51
| | | | | |
1 VDPSHLTPLW NMLKFIFLYG GSYDDKKNNM ENKRYVVNFD GVDLDTKIGY ELLEYKKFVS 60
61 LPMAWIKWDN VVIENHAKRK EIEGNMIQIS INEFARWRND KLNKAQQPTR KQRSLKIPRE 120
121 LPVKFQHRMS ISSVLQQTSK EPFW
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
