| Protein: | SLM1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 686 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SLM1.
| Description | E-value | Query Range |
Subject Range |
|
|
604.0 | [0..24] | [678..13] |
|
|
400.0 | [0..1] | [680..1] |
|
|
390.0 | [0..138] | [664..200] |
|
|
380.0 | [0..1] | [659..1] |
|
|
350.0 | [0..161] | [653..12] |
|
|
284.0 | [0..213] | [627..207] |
|
|
281.0 | [0..213] | [627..21] |
|
|
280.0 | [0..213] | [627..175] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MSKNNTMTSA VSDMLSQQQL NLQHLHNLQQ HTRSMTSADH ANVLQQQQQQ QQQQQQQQQQ 60
61 QQQSASFQNG SLTSDI
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [77-254] |
1 11 21 31 41 51
| | | | | |
1 NQQSYLNGQP VPSTSNSTFQ NNRTLTMNSG GLQGIISNGS PNIDSNTNVT IAVPDPNNNN 60
61 GKQLQGKNSL TNTSILSRAR SSLQRQRLAQ QQQQQQDPRS PLVILVPTAA QPTDILAARF 120
121 SAWRNVIKSV IVYLTEIASI QDEIVRQQLR LSHAVQFPFF SIENQYQPSS QEDKSVQK
|
| Detection Method: | |
| Confidence: | 8.56 |
| Match: | |
| Description: | No description for 1itwA was found. |
|
Region A: Residues: [255-409] |
1 11 21 31 41 51
| | | | | |
1 FFLPLGNGSI QDLPTILNQY HESLASSASK ASRELTNDVI PRLEDLRRDL IVKIKEIKSL 60
61 QSDFKNSCSK ELQQTKQAMK QFQESLKDAR YSVPKQDPFL TKLALDRQIK KQLQEENFLH 120
121 EAFDNLETSG AELEKIVVME IQNSLTIYAR LLGQE
|
| Detection Method: | |
| Confidence: | 8.56 |
| Match: | |
| Description: | No description for 1itwA was found. |
|
Region A: Residues: [410-467] |
1 11 21 31 41 51
| | | | | |
1 AQLVFDILIS KLDSGFFNVD PQFEWDNFIS RDPNFLLPNL PMRTFKEIVY KYQFDPLT
|
| Detection Method: | |
| Confidence: | 8.59 |
| Match: | |
| Description: | No description for 1i5pA was found. |
|
Region A: Residues: [468-592] |
1 11 21 31 41 51
| | | | | |
1 YEIKSGFLER RSKFLKSYSK GYYVLTPNFL HEFKTADRKK DLVPVMSLAL SECTVTEHSR 60
61 KNSTSSPNST GSDAKFVLHA KQNGIIRRGH NWVFKADSYE SMMSWFDNLK ILTSTSNIQD 120
121 KYKFI
|
| Detection Method: | |
| Confidence: | 30.39794 |
| Match: | 1fhwA |
| Description: | Grp1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [593-686] |
1 11 21 31 41 51
| | | | | |
1 TQKLNLNSDG KPKLTNNHTS INKYQLSNAN STMVENDEND DINSNYVGST VTPKLDNQTN 60
61 TNTSMSSLPD TNDSELQDQV PNIYIQTPIN DFKS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
