| Protein: | PRK1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 810 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRK1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..810] | [1..810] |
|
|
0.0 | [20..718] | [18..739] |
|
|
0.0 | [20..718] | [18..739] |
|
|
0.0 | [20..673] | [51..716] |
|
|
0.0 | [20..673] | [54..739] |
|
Region A: Residues: [1-70] |
1 11 21 31 41 51
| | | | | |
1 MNTPQISLYE PGTILTVGSH HAKIIKYLTS GGFAQVYTAE ISPPDPYSNA NIACLKRVIV 60
61 PHKQGLNTLR
|
|
Region B: Residues: [89-109] |
1 11 21 31 41 51
| | | | | |
1 IDSHAARSVN GIAYEVFVLM E
|
| Detection Method: |  |
| Confidence: | 222.201249 |
| Match: | 2phkA_ |
| Description: | gamma-subunit of glycogen phosphorylase kinase (Phk) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [71-88] |
1 11 21 31 41 51
| | | | | |
1 AEVDAMKLLR NNKHVVSY
|
|
Region B: Residues: [110-351] |
1 11 21 31 41 51
| | | | | |
1 FCERGGLIDF MNTRLQNRLQ ESEILEIMSQ TVQGITAMHA LQPPLIHRDI KIENVLISHD 60
61 GLYKVCDFGS VSGVIRPPRN TQEFNYVQHD ILTNTTAQYR SPEMIDLYRG LPIDEKSDIW 120
121 ALGVFLYKIC YYTTPFEKSG EAGILHARYQ YPSFPQYSDR LKNLIRLMLM EAPSQRPNIC 180
181 QVLEEVSRLQ NKPCPIRNFY LLRAMNQNAN TQLAGEPSST TYVPTQKFIP VQSLQSINQP 240
241 PN
|
| Detection Method: | |
| Confidence: | 222.201249 |
| Match: | 2phkA_ |
| Description: | gamma-subunit of glycogen phosphorylase kinase (Phk) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [352-810] |
1 11 21 31 41 51
| | | | | |
1 MMPVTHVSTT PNLGTFPISI NDNNKTEVTA HAGLQVGSHS NLTSPLMKTK SVPLSDEFAS 60
61 LYYKELHPFQ KSQTFKSVES FQSPQRKSMP PLSLTPVNND IFDRVSAINR PNNYVDSETQ 120
121 TIDNMAVPNL KLSPTITSKS LSSTKEIAAP DNINGSKIVR SLSSKLKKVI TGESRGNSPI 180
181 KSRQNTGDSI RSAFGKLRHG FTGNSVNNSR SASFDNNNVN GNGNNTNRRL VSSSTSSFPK 240
241 FNSDTKRKEE SDKNQRLEKR RSMPPSILSD FDQHERNNSR TGSRDYYRSH SPVKKTQASA 300
301 KTTSKPTLIP DNGNVNINQE KKESIQRRVH NLLKSSDDPV TYKSASGYGK YTDIGTETSN 360
361 RHSSVRITPI TEEKFKKTLK DGVLDIKTKS NGKDKSRPPR PPPKPLHLRT EIQKIRNFSR 420
421 LQSKKLPIER ISSEATETIV DVNVDDLEAD FRKRFPSKV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| protein kinase activity | 4.05475891009228 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 3.7974128326421 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 3.59230737331367 | bayes_pls_golite062009 |
| kinase activity | 3.41737435609334 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 3.2342722637405 | bayes_pls_golite062009 |
| binding | 2.41732321506551 | bayes_pls_golite062009 |
| transferase activity | 2.04713540681686 | bayes_pls_golite062009 |
| protein binding | 1.75479345161448 | bayes_pls_golite062009 |
| ATP binding | 1.44435058039859 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 1.41005152726625 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 1.38971642420542 | bayes_pls_golite062009 |
| ribonucleotide binding | 1.16863558166547 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 1.16859376715941 | bayes_pls_golite062009 |
| purine nucleotide binding | 1.15633908642115 | bayes_pls_golite062009 |
| nucleotide binding | 1.14964488472581 | bayes_pls_golite062009 |
| catalytic activity | 0.836142537655721 | bayes_pls_golite062009 |
| AMP-activated protein kinase activity | 0.496765880715405 | bayes_pls_golite062009 |
| magnesium ion binding | 0.439688030503848 | bayes_pls_golite062009 |
|
Region A: Residues: [709-810] |
1 11 21 31 41 51
| | | | | |
1 TSNRHSSVRI TPITEEKFKK TLKDGVLDIK TKSNGKDKSR PPRPPPKPLH LRTEIQKIRN 60
61 FSRLQSKKLP IERISSEATE TIVDVNVDDL EADFRKRFPS KV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
