| Protein: | PCL7 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 285 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PCL7.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-78 | [1..285] | [1..285] |
|
|
4.0E-60 | [48..282] | [5..242] |
|
|
1.0E-56 | [4..282] | [11..282] |
|
|
3.0E-55 | [4..282] | [11..282] |
|
|
8.0E-48 | [19..275] | [158..420] |
|
Region A: Residues: [1-285] |
1 11 21 31 41 51
| | | | | |
1 MELSSPSKKT TTSPINIPGG NRDNLIIGPH SHSFKTDPFS SNNSSLLSKI STNPSLESPF 60
61 SSKSLLDCSP VQAVKKSLES EAKTHSLDEE TNEQTDVKIL NIADFPTDEL ILMISALLNR 120
121 IITANDETTD VSQQVSDETE DELLTPILAF YGKNVPEIAV VQYLERIQKY CPTTNDIFLS 180
181 LLVYFDRISK NYGHSSERNG CAKQLFVMDS GNIHRLLITG VTICTKFLSD FFYSNSRYAK 240
241 VGGISLQELN HLELQFLILC DFKLLVSVEE MQKYANLLYK FWNDQ
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [78-285] |
1 11 21 31 41 51
| | | | | |
1 LESEAKTHSL DEETNEQTDV KILNIADFPT DELILMISAL LNRIITANDE TTDVSQQVSD 60
61 ETEDELLTPI LAFYGKNVPE IAVVQYLERI QKYCPTTNDI FLSLLVYFDR ISKNYGHSSE 120
121 RNGCAKQLFV MDSGNIHRLL ITGVTICTKF LSDFFYSNSR YAKVGGISLQ ELNHLELQFL 180
181 ILCDFKLLVS VEEMQKYANL LYKFWNDQ
|
| Detection Method: | |
| Confidence: | 3.02 |
| Match: | 1w98B |
| Description: | The structural basis of CDK2 activation by cyclin E |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cyclin-dependent protein kinase regulator activity | 5.56043783950774 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase activity | 3.56449795345173 | bayes_pls_golite062009 |
| protein kinase regulator activity | 2.42298912398512 | bayes_pls_golite062009 |
| kinase regulator activity | 2.38269740782712 | bayes_pls_golite062009 |
| binding | 2.37916921859542 | bayes_pls_golite062009 |
| transcription regulator activity | 2.35246308363499 | bayes_pls_golite062009 |
| nucleic acid binding | 1.66282585660189 | bayes_pls_golite062009 |
| DNA binding | 1.62111826122916 | bayes_pls_golite062009 |
| protein binding | 1.37207701115974 | bayes_pls_golite062009 |
| transcription factor activity | 0.942934833538458 | bayes_pls_golite062009 |
| protein kinase activity | 0.936843200737436 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.790804751794544 | bayes_pls_golite062009 |
| kinase activity | 0.76336575273867 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.681773164635831 | bayes_pls_golite062009 |
| hydrolase activity | 0.639492478283697 | bayes_pls_golite062009 |
| transcription factor binding | 0.578625558009429 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.553775750179295 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.529818399573297 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.461517963237846 | bayes_pls_golite062009 |
| kinase binding | 0.288717702650258 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.0259350481945262 | bayes_pls_golite062009 |
