| Protein: | ETP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 585 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ETP1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..563] | [1..563] |
|
|
3.0E-90 | [7..548] | [59..547] |
|
|
5.0E-84 | [7..582] | [59..591] |
|
|
8.0E-71 | [11..577] | [726..1238] |
|
|
5.0E-61 | [70..569] | [48..522] |
|
|
1.0E-46 | [339..584] | [821..1086] |
|
Region A: Residues: [1-209] |
1 11 21 31 41 51
| | | | | |
1 MDQFEYIITL EFGNQNQVES AYQIFKSIPK KLKAKSIGEE SIKSNNQDWQ DWRVCDLEID 60
61 MITDFKNQTS KEEESDLITS QYLGHGIIRL FKLSNANNTL NEKEILTIPG DDTMICILFV 120
121 PTYFTVHDLL HFYIGDDIVN KQVSNFRILR NQQKGMGFNF TVLIKFRNAL DAKNFKEEFN 180
181 GKSFSRMDPE TCHVISVKEI VFQKKLFQR
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.507 | a.4.1 | Homeodomain-like |
| View | Download | 0.501 | a.4.1 | Homeodomain-like |
| View | Download | 0.441 | c.47.1 | Thioredoxin-like |
| View | Download | 0.422 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.418 | a.65.1 | Annexin |
|
Region A: Residues: [210-585] |
1 11 21 31 41 51
| | | | | |
1 PAANEDFPYL LTDPFTVKKK KELVKVELPT CPVCLERMDS ETTGLVTIPC QHTFHCQCLN 60
61 KWKNSRCPVC RHSSLRLSRE SLLKQAGDSA HCATCGSTDN LWICLICGNV GCGRYNSKHA 120
121 IKHYEETLHC FAMDIRTQRV WDYAGDNYVH RLVQNEVDGK LVEVGGSGDD DNNDIGNSDE 180
181 LQNVVYGNRS KNGEKSNSNK KDGELAANFL RHREYHLEYV QVLISQLESQ REYYELKLQE 240
241 KDQTASDSSN VESLKKSMED LKLQFQVTQK EWQKREMAQK SKLEEDMLVI EGLQANLDHL 300
301 SKKQEQLERE NKALEESKQD LEEQVKDLMF YLDSQEKFKD ADESVKEGTI LIQQPHGAAQ 360
361 ASKSKKKRNK NKKAGK
|
| Detection Method: | |
| Confidence: | 21.09691 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.84044925655363 | bayes_pls_golite062009 |
| nucleic acid binding | 2.16650337913343 | bayes_pls_golite062009 |
| RNA binding | 1.55443392348354 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 1.3405047475504 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 1.1717600698632 | bayes_pls_golite062009 |
| protein binding | 1.05805521997665 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.748751181289242 | bayes_pls_golite062009 |
| mRNA binding | 0.372645027860457 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.205114038263623 | bayes_pls_golite062009 |
| hydrolase activity | 0.181856784298799 | bayes_pls_golite062009 |
| protein phosphatase 2B binding | 0.114018372525846 | bayes_pls_golite062009 |
|
Region A: Residues: [189-585] |
1 11 21 31 41 51
| | | | | |
1 PETCHVISVK EIVFQKKLFQ RPAANEDFPY LLTDPFTVKK KKELVKVELP TCPVCLERMD 60
61 SETTGLVTIP CQHTFHCQCL NKWKNSRCPV CRHSSLRLSR ESLLKQAGDS AHCATCGSTD 120
121 NLWICLICGN VGCGRYNSKH AIKHYEETLH CFAMDIRTQR VWDYAGDNYV HRLVQNEVDG 180
181 KLVEVGGSGD DDNNDIGNSD ELQNVVYGNR SKNGEKSNSN KKDGELAANF LRHREYHLEY 240
241 VQVLISQLES QREYYELKLQ EKDQTASDSS NVESLKKSME DLKLQFQVTQ KEWQKREMAQ 300
301 KSKLEEDMLV IEGLQANLDH LSKKQEQLER ENKALEESKQ DLEEQVKDLM FYLDSQEKFK 360
361 DADESVKEGT ILIQQPHGAA QASKSKKKRN KNKKAGK
|
| Detection Method: | |
| Confidence: | 24.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
| Matching Structure (courtesy of the PDB): |
|
