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Protein Overview: SPAC16E8.13

General Information:
Name(s) found: SPAC16E8.13 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • ubiquitin-protein ligase E3 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 547 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    Biological Process: protein ubiquitination [ISSLink to PubMed article]
    Molecular Function: ubiquitin-protein ligase activity [ISSLink to PubMed article]
    zinc ion binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYYYLEIECE SPVKDIFTCN KRRASKVVGN SFGGDHFNFR LGEIKLLSMD FPSSKVPEVE  60
   61 ETSLGHGVVH LYRVFPSESH EFDAPGLILA ILAIPLYMSP SDVLGFLGEK HCKSIQHIRL 120
  121 LKTKDPNRIM ALLKFKDQAS VIRFYTEFNG KAFSQIDPET CHVLHIDKVN IKYPMESSDS 180
  181 SSTEQQLVGP SSKPFASTTP ALIELPTCVV CLERMDSSIT GLITIVCQHT FHCPCLQKWG 240
  241 NSSCPVCRYT QKVQSSEFQS KCTVCCYDKD LWICLICGNI GCGRYHDAHA KQHYVDTAHC 300
  301 YAMELETQRV WDYAGDNYVH RLLQSETDGK LVELSTDGKS SGWTGSSATE SKLRDKMGLE 360
  361 YTQILVSQLE SQRLYYESHL SNMSQKLSRV NEELVLKTKI ATASSNANTD LRSRVDISES 420
  421 KLKKRDDKLK RVSSQLEHLK HNYEEEKSMN ENLLVRIQTL EKQNTTKSDQ IVSMQFQIND 480
  481 LNEQLRDLMF TISASQEIQK MGQSEELQNG TIVLPNNSTV RSNSVKSKKK KKKKPVVPSS 540
  541 SGSLGTD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..547] PSI-BLAST 41.39794 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle