| Protein: | STR3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 465 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STR3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..465] | [1..465] |
|
|
0.0 | [2..409] | [13..398] |
|
|
0.0 | [1..407] | [3..395] |
|
|
0.0 | [2..409] | [13..398] |
|
|
0.0 | [1..407] | [1..379] |
|
|
0.0 | [5..406] | [3..383] |
|
|
0.0 | [5..408] | [2..380] |
|
|
0.0 | [6..406] | [4..379] |
|
|
0.0 | [6..406] | [9..384] |
|
Region A: Residues: [1-267] |
1 11 21 31 41 51
| | | | | |
1 MPIKRLDTVV VNTGSQNDQH SASVPPVYLS TTFKVDLNNE DAQNYDYSRS GNPTRSVLQH 60
61 QIGKLYRVPQ ENVLAVSSGM TALDVILRGL VLLNGTDNHT PTIIAGDDLY GGTQRLLNFF 120
121 KQQSHAVSVH VDTSDFEKFK TVFQSLDKVD CVLLESPTNP LCKVVDIPRI LRFVKCISPD 180
181 TTVVVDNTMM SGLNCNPLQL NPGCDVVYES ATKYLNGHHD LMGGVIISKT PEIASKLYFV 240
241 INSTGAGLSP MDSWLLVRGL KTLGVRL
|
|
Region B: Residues: [308-319] |
1 11 21 31 41 51
| | | | | |
1 DFKLHKSFNN GP
|
| Detection Method: |  |
| Confidence: | 760.9794 |
| Match: | 1ibjA_ |
| Description: | Cystathionine beta-lyase, CBL |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | 2.82824364293374 | bayes_pls_golite062009 |
| glycine dehydrogenase (decarboxylating) activity | 2.82824364293374 | bayes_pls_golite062009 |
| catalytic activity | 2.29878871754893 | bayes_pls_golite062009 |
| L-aspartate:2-oxoglutarate aminotransferase activity | 1.87460342369605 | bayes_pls_golite062009 |
| transcription regulator activity | 1.67701710033155 | bayes_pls_golite062009 |
| DNA binding | 1.4774443071095 | bayes_pls_golite062009 |
| transferase activity | 1.44093490824786 | bayes_pls_golite062009 |
| nucleic acid binding | 1.39741122443159 | bayes_pls_golite062009 |
| transferase activity, transferring nitrogenous groups | 1.28316822767388 | bayes_pls_golite062009 |
| transaminase activity | 1.24990480711889 | bayes_pls_golite062009 |
| transcription factor activity | 1.15775909410582 | bayes_pls_golite062009 |
| binding | 1.09053123792737 | bayes_pls_golite062009 |
| O-phospho-L-serine:2-oxoglutarate aminotransferase activity | 0.994935084630764 | bayes_pls_golite062009 |
| carbon-sulfur lyase activity | 0.698312655247044 | bayes_pls_golite062009 |
| cystathionine beta-lyase activity | 0.6849039330512 | bayes_pls_golite062009 |
| vitamin binding | 0.66463470119531 | bayes_pls_golite062009 |
| cystathionine gamma-lyase activity | 0.505859361763689 | bayes_pls_golite062009 |
| alanine-glyoxylate transaminase activity | 0.48682493494502 | bayes_pls_golite062009 |
| O-acyltransferase activity | 0.452440867878365 | bayes_pls_golite062009 |
| cysteine synthase activity | 0.417849187928985 | bayes_pls_golite062009 |
| structural molecule activity | 0.347975812448725 | bayes_pls_golite062009 |
| glycine hydroxymethyltransferase activity | 0.271623203801431 | bayes_pls_golite062009 |
| pyridoxal phosphate binding | 0.16957228630576 | bayes_pls_golite062009 |
| vitamin B6 binding | 0.16957228630576 | bayes_pls_golite062009 |
| adenosylmethionine-8-amino-7-oxononanoate transaminase activity | 0.0669652799570574 | bayes_pls_golite062009 |
|
Region A: Residues: [268-307] |
1 11 21 31 41 51
| | | | | |
1 YQQQRNAMIL AHWLENSCGF KPTRTNKATK TRFVGLRSNP
|
|
Region B: Residues: [320-465] |
1 11 21 31 41 51
| | | | | |
1 GAVLSFETGS FEHSKRLVSS KKLSIWAVTV SFGCVNSLLS MPCKMSHASI DPELRKERDF 60
61 PEDLVRLCCG IENIVDLKKD LLAAMVDADI IEVRENGKYL FNKLNKNLAV NTTIDDLHKP 120
121 LSIYEEFYNQ DLIRKDSELN IKSSKL
|
| Detection Method: | |
| Confidence: | 760.9794 |
| Match: | 1ibjA_ |
| Description: | Cystathionine beta-lyase, CBL |
| Matching Structure (courtesy of the PDB): |
|
