| Protein: | ITC1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1264 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ITC1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1212] | [1..1062] |
|
|
0.0 | [1..477] | [1..481] |
|
|
0.0 | [1..518] | [16..575] |
|
|
2.0E-92 | [21..364] | [3..324] |
|
|
2.0E-87 | [1..483] | [1..413] |
|
Region A: Residues: [1-119] |
1 11 21 31 41 51
| | | | | |
1 MVLYKRKPIL LPDPKPLPLD LNVQVWHIEE TGEWFSSYEE FLERFDFYTR HHFTCEITGT 60
61 SCLTFFQALD SEETQFKYVE DRFPLKLREP VARFLHFNGI RRLDALVEKV YARFKNDFF
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.355 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.323 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.271 | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.247 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.355 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.323 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.271 | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.263 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.263 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.249 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.246 | a.118.8 | TPR-like |
| View | Download | 0.237 | d.110.4 | SNARE-like |
| View | Download | 0.232 | a.28.1 | ACP-like |
| View | Download | 0.229 | a.70.1 | N-terminal domain of the delta subunit of the F1F0-ATP synthase |
| View | Download | 0.222 | g.45.1 | Pyk2-associated protein beta ARF-GAP domain |
| View | Download | 0.218 | f.18.1 | F1F0 ATP synthase subunit A |
| View | Download | 0.211 | a.1.1 | Globin-like |
| View | Download | 0.209 | d.58.48 | MTH1187-like |
| View | Download | 0.208 | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.207 | a.26.1 | 4-helical cytokines |
| View | Download | 0.201 | a.40.1 | Calponin-homology domain, CH-domain |
|
Region A: Residues: [120-413] |
1 11 21 31 41 51
| | | | | |
1 PGEVVYLRKQ KDSSTTSSNS QQSTPQPDDM VEINSVGNPG LPQYQYQRRY VIKEKVQFNA 60
61 TINPESREIV MPAHTKYMLI EEAASSNKSF IVDQGQIYRD RSTFTKHLIK CFFKITLQRA 120
121 SSKMGAPWCV KPEYLAMYGL TMEWPKDMLK YKEDEPVVAR RSNSANVSSP ESEKNKRQSK 180
181 SSGKSNTSND ASNKKETKKK RKPTEVNDSE NNSSEEDKKK GQNVTSETHS KKRKKEANEE 240
241 PNTENVESVP TPANAEPQAV TITSIMDDLA LPYQHPPNIF PNLTYYNEKL ECIS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [414-506] |
1 11 21 31 41 51
| | | | | |
1 LGSTKLSRPF DSFGKLLQAY QFLNTFGSKI CLSHFSLDQF ITSLKCTDPY ELKGEVVLVN 60
61 IRTQTSKEQE IENNGLPMKN KAETTTEEDS ENP
|
| Detection Method: | |
| Confidence: | 26.853872 |
| Match: | PF02791 |
| Description: | DDT domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [507-1264] |
1 11 21 31 41 51
| | | | | |
1 SDWQRNSFIR DMIMKRNSDK VEYKIVHDDP ASDDILDNIN HNGSALLIEV FTALLRLFIN 60
61 EEGDWSCIVV ENWIIDDKGV LMERKDERGE GEAKQKRNAH GYFLQDKEKI DNLKDTLKEN 120
121 ATEVQKESDA KNETNSESDS KSDSDSEERD PKLEKCLNYR NVNWIERLTK RQFNNSYWLI 180
181 ILLGVLEDCR HLPMYTEFID SFIEKIIPKD ISATQLPKQL WRNFCRKLSF SDKVNALWIL 240
241 VDLVSHFSPD IKAAVDDSME LCGQIRSERF KVARELKTEA AVLSNLQGDL QAIQEKLNKT 300
301 DENTPSADGA DKKDDSESNS EPIDLIIIEK KQKLIEEQDK KVQALQSDKN FLDNCLFEND 360
361 LQRLKPLGLD RYGNRYFWLD HNGVPFPQYP AGMNETPKSN NSLSYHSGRL LIQGPKASSA 420
421 KFFLNVSDEQ LSNWQKIRNS EGISEATREV FGISKTSSGS YNYVENGIEV ELLDSNDRVN 480
481 PLIELTPIQK KIMDETPSRL LLSPDQWYCI DKLEDLSRIM DWLDNWGRKE HDLLRQIRPI 540
541 MERIKSSLSL RDHALSLTAF TKNEEKLLKE LENNEFTENE LNVDSMDVDD KNSGVKSEVD 600
601 VQVDAEEKRE AVIDEKLEVI ADELMKLDDS SKTRNVLNRI QELEDQRDEL LEQKKSIINS 660
661 QRPGARILAR SERKRTKISR GNKVNKQIEI LTDLVNYRHF KAMEDVIAWK NVLANSIWGS 720
721 SLRKNASGNK RSGVIETVDD KLKDIVGQTS RTVTPAPN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.558 | c.5.1 | MurCD N-terminal domain |
| View | Download | 0.526 | c.116.1 | alpha/beta knot |
| View | Download | 0.522 | c.5.1 | MurCD N-terminal domain |
| View | Download | 0.520 | c.47.1 | Thioredoxin-like |
| View | Download | 0.505 | d.68.3 | SirA-like |
|
Region A: Residues: [487-656] |
1 11 21 31 41 51
| | | | | |
1 NGLPMKNKAE TTTEEDSENP SDWQRNSFIR DMIMKRNSDK VEYKIVHDDP ASDDILDNIN 60
61 HNGSALLIEV FTALLRLFIN EEGDWSCIVV ENWIIDDKGV LMERKDERGE GEAKQKRNAH 120
121 GYFLQDKEKI DNLKDTLKEN ATEVQKESDA KNETNSESDS KSDSDSEERD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [657-1264] |
1 11 21 31 41 51
| | | | | |
1 PKLEKCLNYR NVNWIERLTK RQFNNSYWLI ILLGVLEDCR HLPMYTEFID SFIEKIIPKD 60
61 ISATQLPKQL WRNFCRKLSF SDKVNALWIL VDLVSHFSPD IKAAVDDSME LCGQIRSERF 120
121 KVARELKTEA AVLSNLQGDL QAIQEKLNKT DENTPSADGA DKKDDSESNS EPIDLIIIEK 180
181 KQKLIEEQDK KVQALQSDKN FLDNCLFEND LQRLKPLGLD RYGNRYFWLD HNGVPFPQYP 240
241 AGMNETPKSN NSLSYHSGRL LIQGPKASSA KFFLNVSDEQ LSNWQKIRNS EGISEATREV 300
301 FGISKTSSGS YNYVENGIEV ELLDSNDRVN PLIELTPIQK KIMDETPSRL LLSPDQWYCI 360
361 DKLEDLSRIM DWLDNWGRKE HDLLRQIRPI MERIKSSLSL RDHALSLTAF TKNEEKLLKE 420
421 LENNEFTENE LNVDSMDVDD KNSGVKSEVD VQVDAEEKRE AVIDEKLEVI ADELMKLDDS 480
481 SKTRNVLNRI QELEDQRDEL LEQKKSIINS QRPGARILAR SERKRTKISR GNKVNKQIEI 540
541 LTDLVNYRHF KAMEDVIAWK NVLANSIWGS SLRKNASGNK RSGVIETVDD KLKDIVGQTS 600
601 RTVTPAPN
|
| Detection Method: | |
| Confidence: | 1.29 |
| Match: | 2oevA |
| Description: | No description for 2oevA was found. |
